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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=65)
AEFTFEIEEHLLTLSENEKGWTKEINRVSFNGAPAKFDIRAWSPDHTKGKGITLSNEEFQ
TVDAF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3obh-a1-m1-cB 65 65 1.0000 1.0000 1.0000 2.35e-43 3obh-a1-m1-cA_3obh-a1-m1-cB
2 3obh-a1-m1-cA 64 63 0.9692 0.9844 1.0000 4.65e-42 3obh-a1-m1-cA_3obh-a1-m1-cB
3 3pm7-a1-m1-cA 71 58 0.5692 0.5211 0.6379 6.29e-24 3pm7-a1-m1-cB_3pm7-a1-m1-cA
4 3pm7-a1-m1-cB 68 56 0.5385 0.5147 0.6250 2.01e-22 3pm7-a1-m1-cB_3pm7-a1-m1-cA
5 2ltt-a1-m1-cB 74 61 0.6154 0.5405 0.6557 4.08e-22 2ltt-a1-m1-cA_2ltt-a1-m1-cB
6 2ltt-a1-m1-cA 74 61 0.6154 0.5405 0.6557 4.08e-22 2ltt-a1-m1-cA_2ltt-a1-m1-cB
7 6k3c-a1-m1-cB 351 44 0.2000 0.0370 0.2955 1.3 6k3c-a1-m1-cB_6k3c-a1-m1-cA
8 6eu6-a1-m3-cA 405 29 0.1538 0.0247 0.3448 1.7 6eu6-a1-m2-cA_6eu6-a1-m3-cA
9 6eu6-a1-m2-cA 405 29 0.1538 0.0247 0.3448 1.7 6eu6-a1-m2-cA_6eu6-a1-m3-cA
10 6k3c-a1-m1-cA 388 40 0.1846 0.0309 0.3000 2.2 6k3c-a1-m1-cB_6k3c-a1-m1-cA
11 1czj-a1-m2-cA 110 44 0.2308 0.1364 0.3409 5.2 1czj-a1-m1-cA_1czj-a1-m2-cA
12 1czj-a1-m1-cA 110 44 0.2308 0.1364 0.3409 5.2 1czj-a1-m1-cA_1czj-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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