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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
AEKTFKVVSDSGIHARPATILVQTASKWNSEIQLEYNGKTVNLKSIMGVMSLGIPKGATI
KITAEGADAAEAMAALTDTLAKEGLAE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1y50-a2-m4-cA 87 87 1.0000 1.0000 1.0000 1.43e-58 1y50-a2-m2-cA_1y50-a2-m4-cA, 1y50-a2-m3-cA_1y50-a2-m4-cA
2 1y50-a2-m3-cA 87 87 1.0000 1.0000 1.0000 1.43e-58 1y50-a2-m3-cA_1y50-a2-m4-cA
3 1y50-a2-m2-cA 87 87 1.0000 1.0000 1.0000 1.43e-58 1y50-a2-m2-cA_1y50-a2-m4-cA
4 1sph-a1-m1-cB 87 87 0.6897 0.6897 0.6897 5.93e-40 1sph-a1-m1-cA_1sph-a1-m1-cB
5 1sph-a1-m1-cA 87 87 0.6897 0.6897 0.6897 5.93e-40 1sph-a1-m1-cA_1sph-a1-m1-cB
6 2hpr-a2-m2-cA 86 87 0.7011 0.7093 0.7011 5.17e-39 2hpr-a2-m1-cA_2hpr-a2-m2-cA
7 2hpr-a2-m1-cA 86 87 0.7011 0.7093 0.7011 5.17e-39 2hpr-a2-m1-cA_2hpr-a2-m2-cA
8 3le5-a2-m3-cB 87 79 0.4598 0.4598 0.5063 6.26e-24 3le5-a2-m1-cB_3le5-a2-m3-cB
9 3le5-a2-m1-cB 87 79 0.4598 0.4598 0.5063 6.26e-24 3le5-a2-m1-cB_3le5-a2-m3-cB
10 3ccd-a1-m1-cB 85 81 0.2989 0.3059 0.3210 1.79e-10 3ccd-a1-m1-cA_3ccd-a1-m1-cB
11 3ccd-a1-m1-cA 85 81 0.2989 0.3059 0.3210 1.79e-10 3ccd-a1-m1-cA_3ccd-a1-m1-cB
12 5wyr-a1-m1-cB 248 46 0.1494 0.0524 0.2826 1.00 5wyr-a1-m1-cA_5wyr-a1-m1-cB
13 5wyr-a1-m1-cA 242 46 0.1494 0.0537 0.2826 1.0 5wyr-a1-m1-cA_5wyr-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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