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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=58)
AEQRASPLTSIISAVVGILLVVVLGVVFGILIKRRQQKIRKYTMRRLLQETELVEPLG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2n2a-a1-m1-cB 58 58 1.0000 1.0000 1.0000 2.10e-34 2n2a-a1-m1-cA_2n2a-a1-m1-cB
2 2n2a-a1-m1-cA 58 58 1.0000 1.0000 1.0000 2.10e-34 2n2a-a1-m1-cA_2n2a-a1-m1-cB
3 5ob4-a1-m1-cB 44 41 0.7069 0.9318 1.0000 4.89e-08 5ob4-a1-m1-cA_5ob4-a1-m1-cB
4 5ob4-a1-m1-cA 44 41 0.7069 0.9318 1.0000 4.89e-08 5ob4-a1-m1-cA_5ob4-a1-m1-cB
5 2jwa-a1-m1-cB 44 41 0.7069 0.9318 1.0000 4.89e-08 2jwa-a1-m1-cA_2jwa-a1-m1-cB
6 2jwa-a1-m1-cA 44 41 0.7069 0.9318 1.0000 4.89e-08 2jwa-a1-m1-cA_2jwa-a1-m1-cB
7 2m20-a1-m1-cB 60 29 0.3276 0.3167 0.6552 1.28e-04 2m20-a1-m1-cA_2m20-a1-m1-cB
8 2m20-a1-m1-cA 60 29 0.3276 0.3167 0.6552 1.28e-04 2m20-a1-m1-cA_2m20-a1-m1-cB
9 3gop-a1-m2-cA 300 17 0.2414 0.0467 0.8235 0.095 3gop-a1-m1-cA_3gop-a1-m2-cA
10 3gop-a1-m1-cA 300 17 0.2414 0.0467 0.8235 0.095 3gop-a1-m1-cA_3gop-a1-m2-cA
11 5lil-a1-m1-cA 615 25 0.2069 0.0195 0.4800 7.2 5lil-a1-m1-cB_5lil-a1-m1-cA
12 5lil-a1-m1-cB 604 25 0.2069 0.0199 0.4800 7.5 5lil-a1-m1-cB_5lil-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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