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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
AEQSFLFSREEADTLRLKVEELEGERSRLEEEKRMLEAQLERRALQGDYDQSRTKVLHMS
LNPTSVARQRLREDHSQLQAECERLRGLLRAME

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1go4-a1-m1-cH 93 93 1.0000 1.0000 1.0000 1.18e-60 1go4-a1-m1-cE_1go4-a1-m1-cH, 1go4-a1-m1-cH_1go4-a1-m1-cG
2 1go4-a1-m1-cG 100 93 1.0000 0.9300 1.0000 1.20e-60 1go4-a1-m1-cH_1go4-a1-m1-cG
3 1go4-a1-m1-cF 87 87 0.9355 1.0000 1.0000 3.21e-56 1go4-a1-m1-cE_1go4-a1-m1-cF
4 1go4-a1-m1-cE 87 87 0.9355 1.0000 1.0000 3.21e-56 1go4-a1-m1-cE_1go4-a1-m1-cF, 1go4-a1-m1-cE_1go4-a1-m1-cH
5 7khv-a3-m1-cE 586 41 0.1935 0.0307 0.4390 0.78 7khv-a3-m1-cF_7khv-a3-m1-cE
6 7khv-a3-m1-cF 539 41 0.1935 0.0334 0.4390 1.1 7khv-a3-m1-cF_7khv-a3-m1-cE
7 1uqt-a1-m1-cB 450 61 0.2043 0.0422 0.3115 3.4 1uqt-a1-m1-cB_1uqt-a1-m1-cA
8 1uqu-a1-m1-cA 452 61 0.2043 0.0420 0.3115 3.5 1uqu-a1-m2-cB_1uqu-a1-m1-cA
9 1uqt-a1-m1-cA 452 61 0.2043 0.0420 0.3115 3.5 1uqt-a1-m1-cB_1uqt-a1-m1-cA
10 1uqu-a1-m2-cB 449 61 0.2043 0.0423 0.3115 3.5 1uqu-a1-m2-cB_1uqu-a1-m1-cA
11 8c0e-a1-m1-cH 277 55 0.1828 0.0614 0.3091 7.7 8c0e-a1-m1-cH_8c0e-a1-m1-cG

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Reference:
Jacob Schwartz et al.

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