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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
AEQVSKQEISHFKLVKVGTINVSQSGGQISSPSDLREKLSELADAKGGKYYHIIAAREHG
PNFEAVAEVYNDATKLEHHHHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2jna-a1-m1-cB 104 83 1.0000 0.7981 1.0000 2.92e-57 2jna-a1-m1-cA_2jna-a1-m1-cB
2 2jna-a1-m1-cA 104 83 1.0000 0.7981 1.0000 2.92e-57 2jna-a1-m1-cA_2jna-a1-m1-cB
3 2ma8-a1-m1-cB 83 83 1.0000 1.0000 1.0000 1.39e-56 2ma8-a1-m1-cA_2ma8-a1-m1-cB
4 2ma8-a1-m1-cA 83 83 1.0000 1.0000 1.0000 1.39e-56 2ma8-a1-m1-cA_2ma8-a1-m1-cB
5 2fiq-a3-m1-cD 399 50 0.2169 0.0451 0.3600 0.014 2fiq-a3-m1-cB_2fiq-a3-m1-cD, 2fiq-a3-m1-cD_2fiq-a3-m1-cA, 2fiq-a3-m1-cD_2fiq-a3-m1-cC
6 2fiq-a3-m1-cA 400 50 0.2169 0.0450 0.3600 0.014 2fiq-a3-m1-cD_2fiq-a3-m1-cA
7 2fiq-a3-m1-cB 398 50 0.2169 0.0452 0.3600 0.014 2fiq-a3-m1-cB_2fiq-a3-m1-cD
8 2fiq-a3-m1-cC 400 50 0.2169 0.0450 0.3600 0.015 2fiq-a3-m1-cD_2fiq-a3-m1-cC
9 7ebc-a1-m1-cC 523 66 0.2651 0.0421 0.3333 1.3 7ebc-a1-m1-cC_7ebc-a1-m1-cD
10 7ebc-a1-m1-cA 524 66 0.2651 0.0420 0.3333 1.3 7ebc-a1-m1-cA_7ebc-a1-m1-cD
11 7ebc-a1-m1-cD 527 66 0.2651 0.0417 0.3333 1.4 7ebc-a1-m1-cA_7ebc-a1-m1-cD, 7ebc-a1-m1-cB_7ebc-a1-m1-cD, 7ebc-a1-m1-cC_7ebc-a1-m1-cD
12 7ebc-a1-m1-cB 527 66 0.2651 0.0417 0.3333 1.4 7ebc-a1-m1-cB_7ebc-a1-m1-cD
13 6ct6-a1-m1-cB 331 10 0.1084 0.0272 0.9000 4.8 6ct6-a1-m1-cA_6ct6-a1-m1-cB
14 6iog-a1-m1-cB 374 10 0.0964 0.0214 0.8000 6.9 6iog-a1-m1-cA_6iog-a1-m1-cB
15 6x6i-a1-m6-cAAA 391 26 0.1325 0.0281 0.4231 7.0 6x6i-a1-m3-cAAA_6x6i-a1-m6-cAAA, 6x6i-a1-m5-cAAA_6x6i-a1-m6-cAAA
16 6x6i-a1-m5-cAAA 391 26 0.1325 0.0281 0.4231 7.0 6x6i-a1-m5-cAAA_6x6i-a1-m6-cAAA
17 6x6i-a1-m3-cAAA 391 26 0.1325 0.0281 0.4231 7.0 6x6i-a1-m3-cAAA_6x6i-a1-m6-cAAA
18 2i9u-a1-m1-cB 419 67 0.2530 0.0501 0.3134 8.0 2i9u-a1-m1-cA_2i9u-a1-m1-cB
19 2i9u-a1-m1-cA 419 67 0.2530 0.0501 0.3134 8.0 2i9u-a1-m1-cA_2i9u-a1-m1-cB
20 6eoh-a1-m1-cB 284 22 0.1205 0.0352 0.4545 8.7 6eoh-a1-m1-cB_6eoh-a1-m1-cA
21 6eoh-a1-m1-cA 285 22 0.1205 0.0351 0.4545 8.8 6eoh-a1-m1-cB_6eoh-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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