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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=58)
AESADELLALLTSVRQGMTAGEVAAHFGWPLEKARNALEQLFSAGTLRKRSSRYRLKP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3i71-a4-m2-cB 58 58 1.0000 1.0000 1.0000 5.28e-37 3i71-a4-m1-cB_3i71-a4-m2-cB
2 3i71-a4-m1-cB 58 58 1.0000 1.0000 1.0000 5.28e-37 3i71-a4-m1-cB_3i71-a4-m2-cB
3 3i71-a2-m1-cB 58 58 1.0000 1.0000 1.0000 5.28e-37 3i71-a2-m1-cA_3i71-a2-m1-cB
4 3i71-a2-m1-cA 56 56 0.9655 1.0000 1.0000 1.11e-35 3i71-a2-m1-cA_3i71-a2-m1-cB
5 7od9-a1-m1-cF 81 38 0.1897 0.1358 0.2895 0.27 7od9-a1-m1-cF_7od9-a1-m1-cC
6 7od9-a1-m1-cC 90 38 0.1897 0.1222 0.2895 0.43 7od9-a1-m1-cF_7od9-a1-m1-cC
7 6j05-a1-m1-cA 101 40 0.2241 0.1287 0.3250 1.4 6j05-a1-m1-cB_6j05-a1-m1-cA
8 6j05-a1-m1-cB 90 40 0.2241 0.1444 0.3250 1.5 6j05-a1-m1-cB_6j05-a1-m1-cA
9 3dp7-a1-m1-cA 351 50 0.2586 0.0427 0.3000 5.6 3dp7-a1-m1-cB_3dp7-a1-m1-cA
10 3dp7-a1-m1-cB 350 50 0.2586 0.0429 0.3000 5.7 3dp7-a1-m1-cB_3dp7-a1-m1-cA
11 6mdy-a1-m1-cA 242 24 0.1724 0.0413 0.4167 7.0 6mdy-a1-m1-cA_6mdy-a1-m1-cD
12 6mdy-a1-m1-cC 239 24 0.1724 0.0418 0.4167 7.1 6mdy-a1-m1-cC_6mdy-a1-m1-cD
13 6mdy-a1-m1-cB 242 24 0.1724 0.0413 0.4167 7.1 6mdy-a1-m1-cB_6mdy-a1-m1-cD
14 6mdy-a1-m1-cD 255 24 0.1724 0.0392 0.4167 7.8 6mdy-a1-m1-cA_6mdy-a1-m1-cD, 6mdy-a1-m1-cB_6mdy-a1-m1-cD, 6mdy-a1-m1-cC_6mdy-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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