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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
AESHIILLIQQGSDPKTRIWSDHCSLRSAIEYIVGVYQTNQDVSRFFNFFDEIYDCVPLV
YDRHFRAYIPHEKQWLLHHAQEYLTAA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6s2w-a1-m2-cA 87 87 1.0000 1.0000 1.0000 2.29e-62 6s2w-a1-m1-cA_6s2w-a1-m2-cA
2 6s2w-a1-m1-cA 87 87 1.0000 1.0000 1.0000 2.29e-62 6s2w-a1-m1-cA_6s2w-a1-m2-cA
3 7o6l-a1-m1-cB 86 84 0.2529 0.2558 0.2619 1.35e-08 7o6l-a1-m1-cB_7o6l-a1-m1-cA
4 7o6l-a1-m1-cA 91 88 0.2529 0.2418 0.2500 1.54e-08 7o6l-a1-m1-cB_7o6l-a1-m1-cA
5 7x39-a1-m1-cB 117 86 0.2874 0.2137 0.2907 1.86e-08 7x39-a1-m1-cB_7x39-a1-m1-cA
6 7x39-a1-m1-cA 128 86 0.2874 0.1953 0.2907 2.38e-08 7x39-a1-m1-cB_7x39-a1-m1-cA
7 8edv-a2-m1-cC 331 44 0.1609 0.0423 0.3182 0.97 8edv-a2-m1-cD_8edv-a2-m1-cC
8 8edv-a2-m1-cD 309 44 0.1609 0.0453 0.3182 0.97 8edv-a2-m1-cD_8edv-a2-m1-cC
9 4ixo-a1-m1-cB 361 52 0.1609 0.0388 0.2692 1.4 4ixo-a1-m1-cA_4ixo-a1-m1-cB
10 7pwi-a1-m2-cAAA 200 21 0.1379 0.0600 0.5714 3.4 7pwi-a1-m1-cAAA_7pwi-a1-m2-cAAA
11 7pwi-a1-m1-cAAA 200 21 0.1379 0.0600 0.5714 3.4 7pwi-a1-m1-cAAA_7pwi-a1-m2-cAAA
12 4yg7-a1-m1-cK 412 28 0.1264 0.0267 0.3929 4.4 4yg7-a1-m1-cK_4yg7-a1-m1-cD
13 4yg7-a1-m1-cD 414 28 0.1264 0.0266 0.3929 4.4 4yg7-a1-m1-cK_4yg7-a1-m1-cD
14 6rx9-a1-m1-cB 186 35 0.1494 0.0699 0.3714 8.2 6rx9-a1-m1-cB_6rx9-a1-m1-cA
15 6rx9-a1-m1-cA 193 35 0.1494 0.0674 0.3714 8.6 6rx9-a1-m1-cB_6rx9-a1-m1-cA
16 6lz3-a1-m1-cD 486 46 0.1379 0.0247 0.2609 9.5 6lz3-a1-m1-cA_6lz3-a1-m1-cD, 6lz3-a1-m1-cC_6lz3-a1-m1-cD
17 6lz3-a1-m1-cC 486 46 0.1379 0.0247 0.2609 9.5 6lz3-a1-m1-cC_6lz3-a1-m1-cD
18 6lz3-a1-m1-cA 486 46 0.1379 0.0247 0.2609 9.5 6lz3-a1-m1-cA_6lz3-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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