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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
AESSLRVISKEKNSITVEMINYDNTLLRTLVEEILKDDQVDEARYYIKHPVIDNPQIYVR
VKSGKPQSAIKRAVRKLSKLYEDLGTQFQKEFQRYESDH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1xpp-a1-m1-cD 99 99 1.0000 1.0000 1.0000 3.69e-69 1xpp-a1-m1-cB_1xpp-a1-m1-cD, 1xpp-a1-m1-cC_1xpp-a1-m1-cD
2 1xpp-a1-m1-cC 99 99 1.0000 1.0000 1.0000 3.69e-69 1xpp-a1-m1-cC_1xpp-a1-m1-cD
3 1xpp-a1-m1-cB 98 98 0.9899 1.0000 1.0000 2.55e-68 1xpp-a1-m1-cB_1xpp-a1-m1-cD
4 1viy-a1-m1-cB 208 88 0.2727 0.1298 0.3068 0.65 1viy-a1-m1-cA_1viy-a1-m1-cB
5 1viy-a1-m1-cA 208 88 0.2727 0.1298 0.3068 0.65 1viy-a1-m1-cA_1viy-a1-m1-cB
6 2f3o-a2-m7-cB 773 34 0.1111 0.0142 0.3235 1.0 2f3o-a2-m1-cB_2f3o-a2-m7-cB, 2f3o-a2-m6-cB_2f3o-a2-m7-cB
7 2f3o-a2-m6-cB 773 34 0.1111 0.0142 0.3235 1.0 2f3o-a2-m6-cB_2f3o-a2-m7-cB
8 2f3o-a2-m1-cB 773 34 0.1111 0.0142 0.3235 1.0 2f3o-a2-m1-cB_2f3o-a2-m7-cB
9 1n3b-a1-m1-cA 174 61 0.2222 0.1264 0.3607 1.3 1n3b-a1-m1-cA_1n3b-a1-m1-cC
10 1n3b-a1-m1-cC 203 61 0.2222 0.1084 0.3607 1.4 1n3b-a1-m1-cA_1n3b-a1-m1-cC
11 7mcm-a1-m1-cA 215 49 0.1313 0.0605 0.2653 1.8 7mcm-a1-m1-cA_7mcm-a1-m3-cB
12 7mcm-a1-m3-cB 217 49 0.1313 0.0599 0.2653 1.9 7mcm-a1-m1-cA_7mcm-a1-m3-cB, 7mcm-a1-m2-cB_7mcm-a1-m3-cB
13 7mcm-a1-m2-cB 217 49 0.1313 0.0599 0.2653 1.9 7mcm-a1-m2-cB_7mcm-a1-m3-cB
14 6nfe-a1-m1-cB 299 46 0.1717 0.0569 0.3696 6.6 6nfe-a1-m1-cA_6nfe-a1-m1-cB
15 6nfe-a1-m1-cA 298 46 0.1717 0.0570 0.3696 6.6 6nfe-a1-m1-cA_6nfe-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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