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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=60)
AFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVAAAAKVNTLLDIAQANL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3h6p-a1-m1-cA 60 60 1.0000 1.0000 1.0000 1.69e-35 3h6p-a1-m1-cA_3h6p-a1-m1-cB
2 3h6p-a1-m1-cB 67 60 1.0000 0.8955 1.0000 1.78e-35 3h6p-a1-m1-cA_3h6p-a1-m1-cB
3 3q4h-a1-m1-cA 87 59 0.6833 0.4713 0.6949 1.43e-10 3q4h-a1-m1-cC_3q4h-a1-m1-cA
4 3q4h-a1-m1-cC 84 59 0.6833 0.4881 0.6949 1.66e-10 3q4h-a1-m1-cC_3q4h-a1-m1-cA
5 7naa-a2-m1-cC 217 44 0.2667 0.0737 0.3636 2.0 7naa-a2-m1-cC_7naa-a2-m1-cD
6 7naa-a2-m1-cD 234 44 0.2667 0.0684 0.3636 2.2 7naa-a2-m1-cC_7naa-a2-m1-cD
7 7pm4-a1-m1-cD 431 28 0.1833 0.0255 0.3929 8.2 7pm4-a1-m1-cA_7pm4-a1-m1-cD, 7pm4-a1-m1-cB_7pm4-a1-m1-cD
8 7pm4-a1-m1-cB 431 28 0.1833 0.0255 0.3929 8.2 7pm4-a1-m1-cB_7pm4-a1-m1-cD
9 7pm4-a1-m1-cA 431 28 0.1833 0.0255 0.3929 8.2 7pm4-a1-m1-cA_7pm4-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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