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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
AFKLLYKTIEERKGSPLPESYTNYLFSKGEDKILKKIGEECAEVIIACKNNDKEEVVKEV
DVFYHCFVLLAEKNIALEDVREVKERNGKL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1yvw-a1-m1-cD 90 90 1.0000 1.0000 1.0000 2.93e-60 1yvw-a1-m1-cA_1yvw-a1-m1-cD, 1yvw-a1-m1-cB_1yvw-a1-m1-cD, 1yvw-a1-m1-cC_1yvw-a1-m1-cD
2 1yvw-a1-m1-cC 90 90 1.0000 1.0000 1.0000 2.93e-60 1yvw-a1-m1-cC_1yvw-a1-m1-cD
3 1yvw-a1-m1-cB 90 90 1.0000 1.0000 1.0000 2.93e-60 1yvw-a1-m1-cB_1yvw-a1-m1-cD
4 1yvw-a1-m1-cA 90 90 1.0000 1.0000 1.0000 2.93e-60 1yvw-a1-m1-cA_1yvw-a1-m1-cD
5 2a7w-a3-m1-cL 88 88 0.4222 0.4318 0.4318 5.05e-14 2a7w-a3-m1-cI_2a7w-a3-m1-cL, 2a7w-a3-m1-cK_2a7w-a3-m1-cL
6 2a7w-a3-m1-cK 88 88 0.4222 0.4318 0.4318 5.05e-14 2a7w-a3-m1-cK_2a7w-a3-m1-cL
7 2a7w-a3-m1-cI 88 88 0.4222 0.4318 0.4318 5.05e-14 2a7w-a3-m1-cI_2a7w-a3-m1-cL
8 6j2l-a1-m1-cA 200 62 0.2444 0.1100 0.3548 2.84e-05 6j2l-a1-m1-cB_6j2l-a1-m1-cA
9 7bgn-a2-m1-cD 203 82 0.3667 0.1626 0.4024 2.24e-04 7bgn-a2-m1-cD_7bgn-a2-m1-cC
10 7bgn-a2-m1-cC 204 82 0.3667 0.1618 0.4024 2.30e-04 7bgn-a2-m1-cD_7bgn-a2-m1-cC
11 6j2l-a1-m1-cB 185 43 0.1667 0.0811 0.3488 0.012 6j2l-a1-m1-cB_6j2l-a1-m1-cA
12 3gze-a2-m1-cD 182 50 0.1778 0.0879 0.3200 0.48 3gze-a2-m1-cD_3gze-a2-m1-cC
13 3gze-a2-m1-cC 213 41 0.1556 0.0657 0.3415 2.5 3gze-a2-m1-cD_3gze-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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