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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
AFWGVEVGKTFTLKRLHLSQATLGHATNRSILQCNVPLLLCVLTPDKVDSCQLNLEFEEV
IFSVIGPRSVHLTGYFL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7wim-a4-m1-cR 77 77 1.0000 1.0000 1.0000 4.09e-53 7wim-a4-m1-cR_7wim-a4-m1-cS
2 7wim-a4-m1-cS 89 89 1.0000 0.8652 0.8652 7.33e-43 7wim-a4-m1-cR_7wim-a4-m1-cS
3 6j2z-a1-m1-cF 82 82 0.4935 0.4634 0.4634 7.95e-20 6j2z-a1-m1-cF_6j2z-a1-m1-cH
4 6j2z-a2-m1-cC 96 94 0.4935 0.3958 0.4043 1.03e-15 6j2z-a2-m1-cA_6j2z-a2-m1-cC
5 6j2z-a2-m1-cA 96 94 0.4935 0.3958 0.4043 1.03e-15 6j2z-a2-m1-cA_6j2z-a2-m1-cC
6 6j2z-a1-m1-cH 96 94 0.4935 0.3958 0.4043 1.03e-15 6j2z-a1-m1-cF_6j2z-a1-m1-cH
7 1xn1-a1-m1-cF 148 40 0.1688 0.0878 0.3250 1.3 1xn1-a1-m1-cA_1xn1-a1-m1-cF
8 1xn1-a1-m1-cA 148 40 0.1688 0.0878 0.3250 1.3 1xn1-a1-m1-cA_1xn1-a1-m1-cF
9 1di0-a2-m1-cC 146 40 0.1688 0.0890 0.3250 1.5 1di0-a2-m2-cE_1di0-a2-m1-cC
10 1di0-a2-m2-cD 147 40 0.1688 0.0884 0.3250 1.5 1di0-a2-m2-cE_1di0-a2-m2-cD
11 1di0-a2-m2-cE 146 40 0.1688 0.0890 0.3250 1.6 1di0-a2-m2-cE_1di0-a2-m1-cC, 1di0-a2-m2-cE_1di0-a2-m2-cD
12 5o95-a2-m1-cD 241 56 0.1948 0.0622 0.2679 5.3 5o95-a2-m1-cD_5o95-a2-m1-cC
13 5o95-a2-m1-cC 244 56 0.1948 0.0615 0.2679 5.4 5o95-a2-m1-cD_5o95-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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