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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=60)
AGALLRKQELVTQNELLKQQVKIFEEDFQRERSDRERMNEEKEELKKQVEKLQAQVTLSN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7eb9-a1-m1-cC 60 60 1.0000 1.0000 1.0000 1.48e-35 7eb9-a1-m1-cB_7eb9-a1-m1-cC
2 7eb9-a1-m1-cB 54 54 0.9000 1.0000 1.0000 1.23e-30 7eb9-a1-m1-cB_7eb9-a1-m1-cC
3 2v4h-a1-m2-cA 98 38 0.3167 0.1939 0.5000 9.90e-05 2v4h-a1-m1-cA_2v4h-a1-m2-cA, 2v4h-a1-m2-cB_2v4h-a1-m2-cA
4 2v4h-a1-m1-cA 98 38 0.3167 0.1939 0.5000 9.90e-05 2v4h-a1-m1-cA_2v4h-a1-m2-cA, 2v4h-a1-m2-cB_2v4h-a1-m1-cA
5 2v4h-a1-m2-cB 91 38 0.3167 0.2088 0.5000 1.26e-04 2v4h-a1-m2-cB_2v4h-a1-m1-cA, 2v4h-a1-m2-cB_2v4h-a1-m2-cA
6 5h07-a1-m1-cC 66 43 0.2833 0.2576 0.3953 2.67e-04 5h07-a1-m1-cC_5h07-a1-m1-cD
7 5h07-a1-m1-cD 78 43 0.2833 0.2179 0.3953 4.73e-04 5h07-a1-m1-cC_5h07-a1-m1-cD
8 5b83-a2-m1-cF 59 28 0.2000 0.2034 0.4286 0.012 5b83-a2-m1-cE_5b83-a2-m1-cF
9 5b83-a2-m1-cE 50 28 0.2000 0.2400 0.4286 0.013 5b83-a2-m1-cE_5b83-a2-m1-cF
10 4bwn-a1-m1-cB 86 23 0.1833 0.1279 0.4783 0.83 4bwn-a1-m1-cA_4bwn-a1-m1-cB
11 4bwn-a1-m1-cA 86 23 0.1833 0.1279 0.4783 0.83 4bwn-a1-m1-cA_4bwn-a1-m1-cB
12 7x45-a1-m1-cB 122 41 0.2333 0.1148 0.3415 2.3 7x45-a1-m1-cA_7x45-a1-m1-cB
13 7x45-a1-m1-cA 122 41 0.2333 0.1148 0.3415 2.8 7x45-a1-m1-cA_7x45-a1-m1-cB
14 7wqy-a1-m2-cB 171 22 0.1667 0.0585 0.4545 3.3 7wqy-a1-m2-cB_7wqy-a1-m1-cA
15 7wqy-a1-m1-cA 174 22 0.1667 0.0575 0.4545 3.7 7wqy-a1-m2-cB_7wqy-a1-m1-cA
16 6cri-a1-m1-cV 163 22 0.1667 0.0613 0.4545 4.1 6cri-a1-m1-cU_6cri-a1-m1-cV
17 6cri-a1-m1-cU 163 22 0.1667 0.0613 0.4545 4.1 6cri-a1-m1-cU_6cri-a1-m1-cV
18 1r8q-a5-m3-cB 179 22 0.1667 0.0559 0.4545 4.6 1r8q-a5-m1-cA_1r8q-a5-m3-cB
19 1r8q-a5-m1-cA 179 22 0.1667 0.0559 0.4545 4.6 1r8q-a5-m1-cA_1r8q-a5-m3-cB
20 6pta-a2-m1-cB 165 22 0.1500 0.0545 0.4091 5.5 6pta-a2-m1-cD_6pta-a2-m1-cB
21 3qhq-a1-m2-cA 222 26 0.2000 0.0541 0.4615 5.7 3qhq-a1-m2-cB_3qhq-a1-m2-cA
22 3qhq-a1-m1-cA 222 26 0.2000 0.0541 0.4615 5.7 3qhq-a1-m2-cB_3qhq-a1-m1-cA
23 6pta-a2-m1-cD 164 22 0.1500 0.0549 0.4091 6.0 6pta-a2-m1-cD_6pta-a2-m1-cB
24 3qhq-a1-m2-cB 211 26 0.2000 0.0569 0.4615 6.1 3qhq-a1-m2-cB_3qhq-a1-m1-cA, 3qhq-a1-m2-cB_3qhq-a1-m2-cA
25 3o47-a2-m3-cB 289 22 0.1667 0.0346 0.4545 7.5 3o47-a2-m1-cB_3o47-a2-m3-cB
26 3o47-a2-m1-cB 289 22 0.1667 0.0346 0.4545 7.5 3o47-a2-m1-cB_3o47-a2-m3-cB
27 6hdz-a1-m1-cA 421 31 0.1833 0.0261 0.3548 7.6 6hdz-a1-m1-cB_6hdz-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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