Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
AGDIEAGKAKAAVCAACHGQNGISQVPIYPNLAGQKEQYLVAALKAYKAGQRQGGQAPVM
QGQATALSDADIANLAAYYASNPAAA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1cno-a1-m1-cB 86 86 1.0000 1.0000 1.0000 1.19e-55 1cno-a1-m1-cA_1cno-a1-m1-cB
2 1cno-a1-m1-cA 86 86 1.0000 1.0000 1.0000 1.19e-55 1cno-a1-m1-cA_1cno-a1-m1-cB
3 4o1w-a3-m1-cE 79 80 0.5465 0.5949 0.5875 4.87e-27 4o1w-a3-m1-cF_4o1w-a3-m1-cE
4 4o1w-a3-m1-cF 78 80 0.5465 0.6026 0.5875 5.06e-27 4o1w-a3-m1-cF_4o1w-a3-m1-cE
5 5lo9-a1-m1-cB 469 73 0.3372 0.0618 0.3973 1.53e-07 5lo9-a1-m1-cB_5lo9-a1-m1-cA
6 5lo9-a1-m1-cB 469 67 0.2907 0.0533 0.3731 5.19e-05 5lo9-a1-m1-cB_5lo9-a1-m1-cA
7 5lo9-a1-m1-cA 471 72 0.3256 0.0594 0.3889 3.64e-07 5lo9-a1-m1-cB_5lo9-a1-m1-cA
8 5lo9-a1-m1-cA 471 67 0.2907 0.0531 0.3731 5.09e-05 5lo9-a1-m1-cB_5lo9-a1-m1-cA
9 6qpx-a1-m4-cA 454 86 0.3023 0.0573 0.3023 1.0 6qpx-a1-m2-cA_6qpx-a1-m4-cA
10 6qpx-a1-m2-cA 454 86 0.3023 0.0573 0.3023 1.0 6qpx-a1-m2-cA_6qpx-a1-m4-cA
11 1c6o-a1-m1-cB 89 80 0.3140 0.3034 0.3375 3.5 1c6o-a1-m1-cA_1c6o-a1-m1-cB
12 1c6o-a1-m1-cA 89 80 0.3140 0.3034 0.3375 3.5 1c6o-a1-m1-cA_1c6o-a1-m1-cB
13 6hc7-a4-m1-cC 406 65 0.2558 0.0542 0.3385 4.2 6hc7-a4-m1-cB_6hc7-a4-m1-cC
14 6hc7-a4-m1-cB 406 65 0.2558 0.0542 0.3385 4.2 6hc7-a4-m1-cB_6hc7-a4-m1-cC
15 5i34-a1-m1-cA 429 31 0.1279 0.0256 0.3548 7.6 5i34-a1-m1-cB_5i34-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600