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HomodimerDB
>protein (length=79)
AGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQFVAEYEPVLIEI
LVEVMDPSFVCLKIGACPS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2rb3-a2-m1-cC 79 79 1.0000 1.0000 1.0000 1.72e-53 2rb3-a2-m1-cB_2rb3-a2-m1-cC
2 2rb3-a2-m1-cB 79 79 1.0000 1.0000 1.0000 1.72e-53 2rb3-a2-m1-cB_2rb3-a2-m1-cC
3 5u85-a1-m1-cA 78 78 0.8608 0.8718 0.8718 2.44e-45 5u85-a1-m1-cB_5u85-a1-m1-cA
4 5u85-a1-m1-cB 77 77 0.8481 0.8701 0.8701 1.22e-44 5u85-a1-m1-cB_5u85-a1-m1-cA
5 2qyp-a1-m1-cA 78 75 0.3418 0.3462 0.3600 1.82e-11 2qyp-a1-m1-cA_2qyp-a1-m1-cB
6 2qyp-a1-m1-cB 81 75 0.3418 0.3333 0.3600 1.87e-11 2qyp-a1-m1-cA_2qyp-a1-m1-cB
7 2dob-a2-m2-cA 79 76 0.3544 0.3544 0.3684 3.87e-11 2dob-a2-m1-cA_2dob-a2-m2-cA
8 2dob-a2-m1-cA 79 76 0.3544 0.3544 0.3684 3.87e-11 2dob-a2-m1-cA_2dob-a2-m2-cA
9 7p4t-a1-m1-cD 80 76 0.3165 0.3125 0.3289 4.80e-08 7p4t-a1-m1-cA_7p4t-a1-m1-cD, 7p4t-a1-m1-cC_7p4t-a1-m1-cD
10 7p4t-a1-m1-cC 80 76 0.3165 0.3125 0.3289 4.80e-08 7p4t-a1-m1-cB_7p4t-a1-m1-cC, 7p4t-a1-m1-cC_7p4t-a1-m1-cD
11 7p4t-a1-m1-cB 80 76 0.3165 0.3125 0.3289 4.80e-08 7p4t-a1-m1-cB_7p4t-a1-m1-cC
12 7p4t-a1-m1-cA 80 76 0.3165 0.3125 0.3289 4.80e-08 7p4t-a1-m1-cA_7p4t-a1-m1-cD
13 5nxb-a1-m1-cD 80 76 0.3165 0.3125 0.3289 4.80e-08 5nxb-a1-m1-cC_5nxb-a1-m1-cD
14 5nxb-a1-m1-cC 80 76 0.3165 0.3125 0.3289 4.80e-08 5nxb-a1-m1-cC_5nxb-a1-m1-cD
15 6vyn-a3-m1-cF 79 78 0.2532 0.2532 0.2564 6.72e-05 6vyn-a3-m1-cD_6vyn-a3-m1-cF
16 6vyn-a3-m1-cD 78 78 0.2532 0.2564 0.2564 7.34e-05 6vyn-a3-m1-cD_6vyn-a3-m1-cF
17 6vz0-a1-m1-cB 76 75 0.2532 0.2632 0.2667 1.30e-04 6vz0-a1-m1-cA_6vz0-a1-m1-cB
18 6vze-a1-m1-cC 74 75 0.2532 0.2703 0.2667 1.32e-04 6vze-a1-m1-cB_6vze-a1-m1-cC
19 6vz0-a1-m1-cA 74 75 0.2532 0.2703 0.2667 1.32e-04 6vz0-a1-m1-cA_6vz0-a1-m1-cB
20 6vze-a1-m1-cB 73 75 0.2532 0.2740 0.2667 1.48e-04 6vze-a1-m1-cB_6vze-a1-m1-cC, 6vze-a1-m1-cD_6vze-a1-m1-cB
21 6vze-a1-m1-cD 72 75 0.2532 0.2778 0.2667 1.58e-04 6vze-a1-m1-cD_6vze-a1-m1-cB
22 7mbk-a1-m1-cB 82 78 0.2405 0.2317 0.2436 0.001 7mbk-a1-m1-cA_7mbk-a1-m1-cB
23 7mbk-a1-m1-cA 77 77 0.2278 0.2338 0.2338 0.019 7mbk-a1-m1-cA_7mbk-a1-m1-cB
24 5i85-a2-m4-cA 528 69 0.2152 0.0322 0.2464 1.9 5i85-a2-m1-cA_5i85-a2-m4-cA, 5i85-a2-m2-cA_5i85-a2-m4-cA
25 5i85-a2-m2-cA 528 69 0.2152 0.0322 0.2464 1.9 5i85-a2-m2-cA_5i85-a2-m4-cA
26 5i85-a2-m1-cA 528 69 0.2152 0.0322 0.2464 1.9 5i85-a2-m1-cA_5i85-a2-m4-cA
27 5i81-a2-m2-cA 528 69 0.2152 0.0322 0.2464 1.9 5i81-a2-m1-cA_5i81-a2-m2-cA
28 5i81-a2-m1-cA 528 69 0.2152 0.0322 0.2464 1.9 5i81-a2-m1-cA_5i81-a2-m2-cA
29 1iyl-a6-m1-cD 380 34 0.1646 0.0342 0.3824 4.1 1iyl-a6-m1-cD_1iyl-a6-m1-cC
30 1iyl-a6-m1-cC 381 34 0.1646 0.0341 0.3824 4.1 1iyl-a6-m1-cD_1iyl-a6-m1-cC
31 1nmt-a1-m1-cC 389 34 0.1646 0.0334 0.3824 4.1 1nmt-a1-m1-cC_1nmt-a1-m1-cB
32 1nmt-a1-m1-cB 392 34 0.1646 0.0332 0.3824 4.1 1nmt-a1-m1-cC_1nmt-a1-m1-cB
33 5i8i-a2-m1-cD 1658 35 0.1392 0.0066 0.3143 6.5 5i8i-a2-m1-cD_5i8i-a2-m1-cC
34 5i8i-a2-m1-cC 1660 35 0.1392 0.0066 0.3143 6.6 5i8i-a2-m1-cD_5i8i-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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