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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
AGHMKEIKEITKKDVQDAEIYLYGSVVEGDYSIGLSDIDVAIVSDVFEDRNRKLEFFGKI
TKKFFDSPFEFHILTKKEWKMSKRFIRKYRRLD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1ylq-a1-m1-cB 93 93 1.0000 1.0000 1.0000 2.51e-63 1ylq-a1-m1-cA_1ylq-a1-m1-cB
2 1ylq-a1-m1-cA 93 93 1.0000 1.0000 1.0000 2.51e-63 1ylq-a1-m1-cA_1ylq-a1-m1-cB
3 4neg-a1-m1-cA 311 49 0.2043 0.0611 0.3878 0.46 4neg-a1-m1-cB_4neg-a1-m1-cA
4 3eoo-a4-m1-cP 286 33 0.1290 0.0420 0.3636 5.5 3eoo-a4-m1-cK_3eoo-a4-m1-cP, 3eoo-a4-m1-cL_3eoo-a4-m1-cP, 3eoo-a4-m1-cP_3eoo-a4-m1-cO
5 3eoo-a4-m1-cL 286 33 0.1290 0.0420 0.3636 5.5 3eoo-a4-m1-cL_3eoo-a4-m1-cP
6 3eoo-a4-m1-cK 286 33 0.1290 0.0420 0.3636 5.5 3eoo-a4-m1-cK_3eoo-a4-m1-cP
7 3eoo-a4-m1-cO 288 33 0.1290 0.0417 0.3636 5.5 3eoo-a4-m1-cP_3eoo-a4-m1-cO
8 2zg6-a1-m1-cA 198 61 0.1935 0.0909 0.2951 5.5 2zg6-a1-m1-cA_2zg6-a1-m1-cB
9 2zg6-a1-m1-cB 199 61 0.1935 0.0905 0.2951 5.7 2zg6-a1-m1-cA_2zg6-a1-m1-cB
10 4fzl-a3-m1-cB 242 43 0.1290 0.0496 0.2791 7.3 4fzl-a3-m2-cA_4fzl-a3-m1-cB
11 4fzl-a3-m2-cA 239 43 0.1290 0.0502 0.2791 8.1 4fzl-a3-m2-cA_4fzl-a3-m1-cB
12 4fzm-a2-m2-cA 276 43 0.1290 0.0435 0.2791 8.2 4fzm-a2-m1-cA_4fzm-a2-m2-cA
13 4fzm-a2-m1-cA 276 43 0.1290 0.0435 0.2791 8.2 4fzm-a2-m1-cA_4fzm-a2-m2-cA
14 2gv8-a1-m1-cB 438 39 0.1720 0.0365 0.4103 8.4 2gv8-a1-m1-cA_2gv8-a1-m1-cB
15 2gv8-a1-m1-cA 438 39 0.1720 0.0365 0.4103 8.4 2gv8-a1-m1-cA_2gv8-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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