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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
AGQLHAALDRISDRQAAARVQAEKFTLGEPGIALNDVMADMQKASVSMQMGIQVRNKLVA
AYQEVMSMQV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7e80-a1-m1-cr 70 70 1.0000 1.0000 1.0000 1.09e-45 7e80-a1-m1-cv_7e80-a1-m1-cr
2 7e80-a1-m1-cv 38 38 0.5429 1.0000 1.0000 2.73e-20 7e80-a1-m1-cv_7e80-a1-m1-cr
3 3u1k-a2-m1-cD 614 31 0.1714 0.0195 0.3871 2.0 3u1k-a2-m1-cD_3u1k-a2-m1-cB
4 5zf6-a1-m1-cA 560 31 0.1714 0.0214 0.3871 2.0 5zf6-a1-m1-cB_5zf6-a1-m1-cA
5 5zf6-a1-m1-cB 548 31 0.1714 0.0219 0.3871 2.0 5zf6-a1-m1-cB_5zf6-a1-m1-cA
6 3u1k-a2-m1-cB 617 31 0.1714 0.0194 0.3871 2.0 3u1k-a2-m1-cD_3u1k-a2-m1-cB
7 3u1k-a1-m3-cA 619 31 0.1714 0.0194 0.3871 2.0 3u1k-a1-m2-cA_3u1k-a1-m3-cA
8 3u1k-a1-m2-cA 619 31 0.1714 0.0194 0.3871 2.0 3u1k-a1-m2-cA_3u1k-a1-m3-cA
9 4o87-a3-m1-cA 318 59 0.2143 0.0472 0.2542 6.8 4o87-a3-m1-cA_4o87-a3-m2-cB
10 4o87-a3-m2-cB 319 59 0.2143 0.0470 0.2542 6.8 4o87-a3-m1-cA_4o87-a3-m2-cB, 4o87-a3-m1-cB_4o87-a3-m2-cB
11 4o87-a3-m1-cB 319 59 0.2143 0.0470 0.2542 6.8 4o87-a3-m1-cB_4o87-a3-m2-cB
12 2yew-a1-m9-cK 425 27 0.1429 0.0235 0.3704 8.3 2yew-a1-m24-cH_2yew-a1-m9-cK, 2yew-a1-m9-cH_2yew-a1-m9-cK
13 2yew-a1-m9-cH 425 27 0.1429 0.0235 0.3704 8.3 2yew-a1-m9-cH_2yew-a1-m9-cK
14 2yew-a1-m24-cH 425 27 0.1429 0.0235 0.3704 8.3 2yew-a1-m24-cH_2yew-a1-m9-cK

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Reference:
Jacob Schwartz et al.

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