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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
AHELRYSIYRDLWERGFFLSAAGKFGGDFLVYPGDPLRFHAHYIAQCWAPEDTIPLQDLG
TSVRKTLLLCSPQPDGKVVYTSLQWASL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6z9u-a1-m1-cA 88 88 1.0000 1.0000 1.0000 1.62e-62 6z9u-a1-m1-cA_6z9u-a1-m1-cC
2 6z9u-a1-m1-cC 95 94 1.0000 0.9263 0.9362 6.21e-60 6z9u-a1-m1-cA_6z9u-a1-m1-cC
3 3ajv-a1-m1-cD 178 86 0.3864 0.1910 0.3953 3.58e-10 3ajv-a1-m1-cD_3ajv-a1-m1-cB
4 3ajv-a1-m1-cB 180 86 0.3864 0.1889 0.3953 4.00e-10 3ajv-a1-m1-cD_3ajv-a1-m1-cB
5 5x89-a1-m2-cA 337 91 0.3409 0.0890 0.3297 6.00e-10 5x89-a1-m1-cA_5x89-a1-m2-cA
6 5x89-a1-m2-cA 337 35 0.1477 0.0386 0.3714 0.36 5x89-a1-m1-cA_5x89-a1-m2-cA
7 5x89-a1-m1-cA 337 91 0.3409 0.0890 0.3297 6.00e-10 5x89-a1-m1-cA_5x89-a1-m2-cA
8 5x89-a1-m1-cA 337 35 0.1477 0.0386 0.3714 0.36 5x89-a1-m1-cA_5x89-a1-m2-cA
9 1a79-a1-m1-cD 171 92 0.2955 0.1520 0.2826 1.13e-08 1a79-a1-m1-cA_1a79-a1-m1-cD, 1a79-a1-m1-cC_1a79-a1-m1-cD
10 1a79-a1-m1-cC 171 92 0.2955 0.1520 0.2826 1.13e-08 1a79-a1-m1-cA_1a79-a1-m1-cC, 1a79-a1-m1-cC_1a79-a1-m1-cD
11 1a79-a1-m1-cA 171 92 0.2955 0.1520 0.2826 1.13e-08 1a79-a1-m1-cA_1a79-a1-m1-cC, 1a79-a1-m1-cA_1a79-a1-m1-cD
12 2cv8-a2-m2-cB 176 82 0.2955 0.1477 0.3171 2.09e-05 2cv8-a2-m2-cA_2cv8-a2-m2-cB
13 1r11-a1-m1-cB 303 64 0.2955 0.0858 0.4062 1.04e-04 1r11-a1-m1-cA_1r11-a1-m1-cB
14 1r11-a1-m1-cA 303 64 0.2955 0.0858 0.4062 1.04e-04 1r11-a1-m1-cA_1r11-a1-m1-cB
15 2zyz-a1-m1-cD 183 90 0.3295 0.1585 0.3222 4.18e-04 2zyz-a1-m1-cB_2zyz-a1-m1-cD
16 2zyz-a1-m1-cB 183 90 0.3295 0.1585 0.3222 4.18e-04 2zyz-a1-m1-cB_2zyz-a1-m1-cD
17 2cv8-a2-m2-cA 156 31 0.1591 0.0897 0.4516 0.004 2cv8-a2-m1-cA_2cv8-a2-m2-cA, 2cv8-a2-m2-cA_2cv8-a2-m2-cB
18 2cv8-a2-m1-cA 156 31 0.1591 0.0897 0.4516 0.004 2cv8-a2-m1-cA_2cv8-a2-m2-cA
19 3iey-a2-m2-cA 147 29 0.1591 0.0952 0.4828 0.009 3iey-a2-m1-cA_3iey-a2-m2-cA
20 3iey-a2-m1-cA 147 29 0.1591 0.0952 0.4828 0.009 3iey-a2-m1-cA_3iey-a2-m2-cA
21 4fz2-a1-m1-cB 386 80 0.2273 0.0518 0.2500 0.016 4fz2-a1-m1-cA_4fz2-a1-m1-cB
22 4fz2-a1-m1-cA 386 80 0.2273 0.0518 0.2500 0.016 4fz2-a1-m1-cA_4fz2-a1-m1-cB
23 2ohc-a1-m1-cA 289 68 0.2500 0.0761 0.3235 0.096 2ohc-a1-m1-cB_2ohc-a1-m1-cA
24 2ohc-a1-m1-cB 288 68 0.2500 0.0764 0.3235 0.097 2ohc-a1-m1-cB_2ohc-a1-m1-cA
25 1a4e-a1-m1-cD 488 61 0.2159 0.0389 0.3115 2.3 1a4e-a1-m1-cA_1a4e-a1-m1-cD, 1a4e-a1-m1-cB_1a4e-a1-m1-cD, 1a4e-a1-m1-cC_1a4e-a1-m1-cD
26 1a4e-a1-m1-cC 488 61 0.2159 0.0389 0.3115 2.3 1a4e-a1-m1-cC_1a4e-a1-m1-cD
27 1a4e-a1-m1-cB 488 61 0.2159 0.0389 0.3115 2.3 1a4e-a1-m1-cB_1a4e-a1-m1-cD
28 1a4e-a1-m1-cA 488 61 0.2159 0.0389 0.3115 2.3 1a4e-a1-m1-cA_1a4e-a1-m1-cD
29 5iu6-a1-m2-cC 237 21 0.1250 0.0464 0.5238 6.7 5iu6-a1-m1-cB_5iu6-a1-m2-cC
30 5iu6-a1-m2-cB 237 21 0.1250 0.0464 0.5238 6.7 5iu6-a1-m1-cA_5iu6-a1-m2-cB
31 5iu6-a1-m1-cB 237 21 0.1250 0.0464 0.5238 6.7 5iu6-a1-m1-cB_5iu6-a1-m2-cC
32 5iu6-a1-m1-cA 237 21 0.1250 0.0464 0.5238 6.7 5iu6-a1-m1-cA_5iu6-a1-m2-cB
33 2ec2-a3-m1-cE 129 48 0.1477 0.1008 0.2708 8.7 2ec2-a3-m1-cE_2ec2-a3-m1-cF

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Reference:
Jacob Schwartz et al.

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