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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
AIDVDRTLAVLRRKLEALGYSDPLEPASLQLVQKLVEDLVHTTDSYTAVKQQCAKQAQEI
AAFDTR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5fcm-a2-m1-cC 70 66 1.0000 0.9429 1.0000 5.95e-43 5fcm-a2-m1-cD_5fcm-a2-m1-cC
2 5fcm-a1-m1-cA 68 66 1.0000 0.9706 1.0000 8.17e-43 5fcm-a1-m1-cB_5fcm-a1-m1-cA
3 5fcm-a2-m1-cD 66 66 1.0000 1.0000 1.0000 9.53e-43 5fcm-a2-m1-cD_5fcm-a2-m1-cC
4 5fcm-a1-m1-cB 63 63 0.9545 1.0000 1.0000 1.52e-40 5fcm-a1-m1-cB_5fcm-a1-m1-cA
5 3ln7-a1-m1-cB 710 46 0.2424 0.0225 0.3478 0.86 3ln7-a1-m1-cB_3ln7-a1-m1-cA
6 4zo4-a1-m1-cC 197 23 0.1364 0.0457 0.3913 1.6 4zo4-a1-m1-cD_4zo4-a1-m1-cC
7 4zo4-a1-m1-cA 198 23 0.1364 0.0455 0.3913 1.6 4zo4-a1-m1-cD_4zo4-a1-m1-cA
8 4zo4-a1-m1-cD 191 23 0.1364 0.0471 0.3913 1.6 4zo4-a1-m1-cB_4zo4-a1-m1-cD, 4zo4-a1-m1-cD_4zo4-a1-m1-cA, 4zo4-a1-m1-cD_4zo4-a1-m1-cC
9 4zo4-a1-m1-cB 191 23 0.1364 0.0471 0.3913 1.6 4zo4-a1-m1-cB_4zo4-a1-m1-cD
10 2gup-a1-m2-cA 283 43 0.2576 0.0601 0.3953 1.8 2gup-a1-m1-cA_2gup-a1-m2-cA
11 2gup-a1-m1-cA 283 43 0.2576 0.0601 0.3953 1.8 2gup-a1-m1-cA_2gup-a1-m2-cA
12 7eku-a1-m1-cA 1525 44 0.2424 0.0105 0.3636 2.3 7eku-a1-m1-cB_7eku-a1-m1-cA
13 7ejp-a1-m1-cB 1526 44 0.2424 0.0105 0.3636 2.4 7ejp-a1-m1-cA_7ejp-a1-m1-cB
14 7ejp-a1-m1-cA 1526 44 0.2424 0.0105 0.3636 2.4 7ejp-a1-m1-cA_7ejp-a1-m1-cB
15 2xz7-a1-m2-cA 324 43 0.2576 0.0525 0.3953 3.2 2xz7-a1-m1-cA_2xz7-a1-m2-cA
16 2xz7-a1-m1-cA 324 43 0.2576 0.0525 0.3953 3.2 2xz7-a1-m1-cA_2xz7-a1-m2-cA
17 2zb3-a2-m2-cA 345 28 0.1667 0.0319 0.3929 3.3 2zb3-a2-m1-cA_2zb3-a2-m2-cA
18 2zb3-a2-m1-cA 345 28 0.1667 0.0319 0.3929 3.3 2zb3-a2-m1-cA_2zb3-a2-m2-cA
19 7c8z-a2-m3-cG 383 46 0.2121 0.0366 0.3043 3.7 7c8z-a2-m2-cG_7c8z-a2-m3-cG
20 7c8z-a2-m2-cG 383 46 0.2121 0.0366 0.3043 3.7 7c8z-a2-m2-cG_7c8z-a2-m3-cG
21 2z7b-a1-m4-cA 233 44 0.2273 0.0644 0.3409 4.7 2z7b-a1-m2-cA_2z7b-a1-m4-cA
22 2z7b-a1-m2-cA 233 44 0.2273 0.0644 0.3409 4.7 2z7b-a1-m2-cA_2z7b-a1-m4-cA
23 8e55-a1-m1-cD 195 46 0.1970 0.0667 0.2826 5.2 8e55-a1-m1-cC_8e55-a1-m1-cD
24 8e55-a1-m1-cC 195 46 0.1970 0.0667 0.2826 5.2 8e55-a1-m1-cC_8e55-a1-m1-cD
25 2zb8-a2-m2-cA 342 37 0.2121 0.0409 0.3784 5.6 2zb8-a2-m1-cA_2zb8-a2-m2-cA
26 2zb8-a2-m1-cA 342 37 0.2121 0.0409 0.3784 5.6 2zb8-a2-m1-cA_2zb8-a2-m2-cA
27 3ge5-a1-m1-cB 170 24 0.1515 0.0588 0.4167 7.5 3ge5-a1-m1-cB_3ge5-a1-m1-cA
28 3ge5-a1-m1-cA 171 24 0.1515 0.0585 0.4167 7.9 3ge5-a1-m1-cB_3ge5-a1-m1-cA
29 6j75-a2-m1-cD 477 24 0.1364 0.0189 0.3750 9.3 6j75-a2-m1-cC_6j75-a2-m1-cD
30 6j75-a2-m1-cC 477 24 0.1364 0.0189 0.3750 9.3 6j75-a2-m1-cC_6j75-a2-m1-cD
31 3ivr-a1-m1-cB 393 33 0.1667 0.0280 0.3333 9.5 3ivr-a1-m1-cB_3ivr-a1-m1-cA
32 3ivr-a1-m1-cA 394 33 0.1667 0.0279 0.3333 9.6 3ivr-a1-m1-cB_3ivr-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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