Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=76)
AIRRNMAVFSMSVVSKLTDLTPRQIRYYETHELIKPERTEGQKRLFSLNDLERLLEIKSL
LEKGFNIKEIKQIYDS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7tea-a2-m1-cA 76 76 1.0000 1.0000 1.0000 4.38e-51 7tea-a2-m1-cA_7tea-a2-m1-cC
2 7tea-a2-m1-cC 76 76 0.9868 0.9868 0.9868 1.70e-48 7tea-a2-m1-cA_7tea-a2-m1-cC
3 4r4e-a1-m1-cA 83 72 0.5395 0.4940 0.5694 5.97e-25 4r4e-a1-m1-cA_4r4e-a1-m1-cB
4 4r4e-a1-m1-cB 84 72 0.5395 0.4881 0.5694 6.55e-25 4r4e-a1-m1-cA_4r4e-a1-m1-cB
5 7tec-a1-m2-cA 72 69 0.5132 0.5417 0.5652 1.36e-21 7tec-a1-m1-cA_7tec-a1-m2-cA
6 7tec-a1-m1-cA 72 69 0.5132 0.5417 0.5652 1.36e-21 7tec-a1-m1-cA_7tec-a1-m2-cA
7 4r24-a1-m2-cB 85 68 0.3816 0.3412 0.4265 9.63e-14 4r24-a1-m1-cB_4r24-a1-m2-cB
8 4r24-a1-m1-cB 85 68 0.3816 0.3412 0.4265 9.63e-14 4r24-a1-m1-cB_4r24-a1-m2-cB
9 3hh0-a1-m1-cB 128 64 0.3289 0.1953 0.3906 4.88e-08 3hh0-a1-m1-cD_3hh0-a1-m1-cB
10 3hh0-a1-m1-cD 127 64 0.3289 0.1969 0.3906 5.06e-08 3hh0-a1-m1-cC_3hh0-a1-m1-cD, 3hh0-a1-m1-cD_3hh0-a1-m1-cA, 3hh0-a1-m1-cD_3hh0-a1-m1-cB
11 3hh0-a1-m1-cC 127 64 0.3289 0.1969 0.3906 5.06e-08 3hh0-a1-m1-cC_3hh0-a1-m1-cD
12 3hh0-a1-m1-cA 131 64 0.3289 0.1908 0.3906 6.61e-08 3hh0-a1-m1-cD_3hh0-a1-m1-cA
13 4wls-a1-m1-cB 108 66 0.2763 0.1944 0.3182 9.82e-07 4wls-a1-m1-cA_4wls-a1-m1-cB
14 4wls-a1-m1-cA 108 66 0.2763 0.1944 0.3182 9.82e-07 4wls-a1-m1-cA_4wls-a1-m1-cB
15 1r8d-a1-m1-cA 109 68 0.3026 0.2110 0.3382 4.32e-06 1r8d-a1-m1-cB_1r8d-a1-m1-cA
16 1r8d-a1-m1-cB 107 68 0.3026 0.2150 0.3382 4.80e-06 1r8d-a1-m1-cB_1r8d-a1-m1-cA
17 1q06-a1-m1-cA 122 68 0.2763 0.1721 0.3088 4.93e-05 1q06-a1-m1-cA_1q06-a1-m1-cB
18 1q06-a1-m1-cB 126 68 0.2763 0.1667 0.3088 5.41e-05 1q06-a1-m1-cA_1q06-a1-m1-cB
19 5gpe-a4-m1-cG 129 63 0.2763 0.1628 0.3333 9.28e-05 5gpe-a4-m1-cH_5gpe-a4-m1-cG
20 5gpe-a4-m1-cH 128 63 0.2763 0.1641 0.3333 1.05e-04 5gpe-a4-m1-cH_5gpe-a4-m1-cG
21 2vz4-a1-m2-cA 100 68 0.2763 0.2100 0.3088 1.07e-04 2vz4-a1-m1-cA_2vz4-a1-m2-cA
22 2vz4-a1-m1-cA 100 68 0.2763 0.2100 0.3088 1.07e-04 2vz4-a1-m1-cA_2vz4-a1-m2-cA
23 6jgw-a1-m1-cB 116 61 0.2632 0.1724 0.3279 1.20e-04 6jgw-a1-m1-cB_6jgw-a1-m1-cA
24 6jni-a2-m1-cC 128 61 0.2632 0.1562 0.3279 1.26e-04 6jni-a2-m1-cC_6jni-a2-m1-cD
25 6jgw-a1-m1-cA 125 61 0.2632 0.1600 0.3279 1.46e-04 6jgw-a1-m1-cB_6jgw-a1-m1-cA
26 6jni-a2-m1-cD 145 61 0.2632 0.1379 0.3279 1.61e-04 6jni-a2-m1-cC_6jni-a2-m1-cD
27 3q2y-a1-m2-cA 276 71 0.2895 0.0797 0.3099 0.021 3q2y-a1-m1-cA_3q2y-a1-m2-cA
28 3q2y-a1-m1-cA 276 71 0.2895 0.0797 0.3099 0.021 3q2y-a1-m1-cA_3q2y-a1-m2-cA
29 7cla-a1-m2-cA 139 55 0.2105 0.1151 0.2909 0.40 7cla-a1-m1-cA_7cla-a1-m2-cA
30 7cla-a1-m1-cA 139 55 0.2105 0.1151 0.2909 0.40 7cla-a1-m1-cA_7cla-a1-m2-cA
31 4ua1-a1-m1-cB 125 65 0.2895 0.1760 0.3385 3.5 4ua1-a1-m1-cA_4ua1-a1-m1-cB
32 2wwi-a1-m2-cA 208 20 0.1711 0.0625 0.6500 3.7 2wwi-a1-m1-cA_2wwi-a1-m2-cA
33 2wwi-a1-m1-cA 208 20 0.1711 0.0625 0.6500 3.7 2wwi-a1-m1-cA_2wwi-a1-m2-cA
34 1vz0-a4-m1-cE 191 61 0.2237 0.0890 0.2787 4.5 1vz0-a4-m1-cF_1vz0-a4-m1-cE
35 1vz0-a4-m1-cF 188 59 0.2237 0.0904 0.2881 4.7 1vz0-a4-m1-cF_1vz0-a4-m1-cE
36 4ua1-a1-m1-cA 124 65 0.2632 0.1613 0.3077 6.1 4ua1-a1-m1-cA_4ua1-a1-m1-cB
37 3mjk-a3-m1-cY 129 29 0.1579 0.0930 0.4138 8.5 3mjk-a3-m1-cX_3mjk-a3-m1-cY
38 1rlk-a2-m2-cA 116 34 0.1579 0.1034 0.3529 8.6 1rlk-a2-m1-cA_1rlk-a2-m2-cA
39 1rlk-a2-m1-cA 116 34 0.1579 0.1034 0.3529 8.6 1rlk-a2-m1-cA_1rlk-a2-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600