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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=67)
AISMDLLRAVLQPSINEEIQTVFNKYMKFFQKAALNVRDNVGEEVDAEQLIQEACRSCLE
QAKLLFS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4d6k-a3-m1-cC 67 67 1.0000 1.0000 1.0000 3.28e-44 4d6k-a3-m1-cC_4d6k-a3-m1-cD
2 4d6k-a3-m1-cD 72 67 1.0000 0.9306 1.0000 3.73e-44 4d6k-a3-m1-cC_4d6k-a3-m1-cD
3 2rdy-a1-m1-cB 769 64 0.1940 0.0169 0.2031 3.4 2rdy-a1-m1-cA_2rdy-a1-m1-cB
4 2rdy-a1-m1-cA 769 64 0.1940 0.0169 0.2031 3.4 2rdy-a1-m1-cA_2rdy-a1-m1-cB
5 2x28-a2-m2-cA 219 33 0.2090 0.0639 0.4242 3.9 2x28-a2-m1-cA_2x28-a2-m2-cA
6 2x28-a2-m1-cA 219 33 0.2090 0.0639 0.4242 3.9 2x28-a2-m1-cA_2x28-a2-m2-cA
7 3ip1-a1-m1-cC 388 25 0.1791 0.0309 0.4800 7.1 3ip1-a1-m1-cC_3ip1-a1-m1-cD
8 3ip1-a1-m1-cD 389 25 0.1791 0.0308 0.4800 7.1 3ip1-a1-m1-cA_3ip1-a1-m1-cD, 3ip1-a1-m1-cB_3ip1-a1-m1-cD, 3ip1-a1-m1-cC_3ip1-a1-m1-cD
9 3ip1-a1-m1-cB 389 25 0.1791 0.0308 0.4800 7.1 3ip1-a1-m1-cB_3ip1-a1-m1-cD
10 3ip1-a1-m1-cA 389 25 0.1791 0.0308 0.4800 7.1 3ip1-a1-m1-cA_3ip1-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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