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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
AIVSMECKTIVSQYGEMIWDLLVSGVRPDQVCSQAGLCFVEAPLCTACEMAVVWMQNQLK
QEGTKEKVLEYVNQLCEKIP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3rfi-a2-m2-cA 80 80 1.0000 1.0000 1.0000 1.05e-54 3rfi-a2-m1-cA_3rfi-a2-m2-cA
2 3rfi-a2-m1-cA 80 80 1.0000 1.0000 1.0000 1.05e-54 3rfi-a2-m1-cA_3rfi-a2-m2-cA
3 2qyp-a1-m1-cA 78 36 0.1875 0.1923 0.4167 0.004 2qyp-a1-m1-cA_2qyp-a1-m1-cB
4 2qyp-a1-m1-cA 78 36 0.1125 0.1154 0.2500 4.7 2qyp-a1-m1-cA_2qyp-a1-m1-cB
5 2qyp-a1-m1-cB 81 36 0.1875 0.1852 0.4167 0.004 2qyp-a1-m1-cA_2qyp-a1-m1-cB
6 2qyp-a1-m1-cB 81 42 0.1250 0.1235 0.2381 2.2 2qyp-a1-m1-cA_2qyp-a1-m1-cB
7 2dob-a2-m2-cA 79 35 0.1875 0.1899 0.4286 0.014 2dob-a2-m1-cA_2dob-a2-m2-cA
8 2dob-a2-m1-cA 79 35 0.1875 0.1899 0.4286 0.014 2dob-a2-m1-cA_2dob-a2-m2-cA
9 5u85-a1-m1-cB 77 33 0.1375 0.1429 0.3333 0.19 5u85-a1-m1-cB_5u85-a1-m1-cA
10 5u85-a1-m1-cA 78 33 0.1375 0.1410 0.3333 0.20 5u85-a1-m1-cB_5u85-a1-m1-cA
11 6vyn-a3-m1-cF 79 33 0.1125 0.1139 0.2727 0.23 6vyn-a3-m1-cD_6vyn-a3-m1-cF
12 6vyn-a3-m1-cF 79 37 0.1250 0.1266 0.2703 8.6 6vyn-a3-m1-cD_6vyn-a3-m1-cF
13 6vyn-a3-m1-cD 78 33 0.1125 0.1154 0.2727 0.23 6vyn-a3-m1-cD_6vyn-a3-m1-cF
14 6vyn-a3-m1-cD 78 37 0.1250 0.1282 0.2703 7.7 6vyn-a3-m1-cD_6vyn-a3-m1-cF
15 7p4t-a1-m1-cD 80 33 0.1500 0.1500 0.3636 0.24 7p4t-a1-m1-cA_7p4t-a1-m1-cD, 7p4t-a1-m1-cC_7p4t-a1-m1-cD
16 7p4t-a1-m1-cC 80 33 0.1500 0.1500 0.3636 0.24 7p4t-a1-m1-cB_7p4t-a1-m1-cC, 7p4t-a1-m1-cC_7p4t-a1-m1-cD
17 7p4t-a1-m1-cB 80 33 0.1500 0.1500 0.3636 0.24 7p4t-a1-m1-cB_7p4t-a1-m1-cC
18 7p4t-a1-m1-cA 80 33 0.1500 0.1500 0.3636 0.24 7p4t-a1-m1-cA_7p4t-a1-m1-cD
19 5nxb-a1-m1-cD 80 33 0.1500 0.1500 0.3636 0.24 5nxb-a1-m1-cC_5nxb-a1-m1-cD
20 5nxb-a1-m1-cC 80 33 0.1500 0.1500 0.3636 0.24 5nxb-a1-m1-cC_5nxb-a1-m1-cD
21 7sqc-a1-m1-cY7 476 24 0.1375 0.0231 0.4583 1.9 7sqc-a1-m1-cY6_7sqc-a1-m1-cY7
22 7sqc-a1-m1-cY6 476 24 0.1375 0.0231 0.4583 1.9 7sqc-a1-m1-cY6_7sqc-a1-m1-cY7

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Reference:
Jacob Schwartz et al.

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