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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
AKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTAVVSSDEKQDFTYLRNE
FEAFGQTLNVKINIQSAAIFE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1zpv-a2-m1-cA 82 81 1.0000 0.9878 1.0000 6.98e-53 1zpv-a2-m1-cA_1zpv-a2-m1-cC
2 1zpv-a1-m1-cA 82 81 1.0000 0.9878 1.0000 6.98e-53 1zpv-a1-m1-cB_1zpv-a1-m1-cA
3 1zpv-a2-m1-cC 84 81 1.0000 0.9643 1.0000 7.01e-53 1zpv-a2-m1-cA_1zpv-a2-m1-cC
4 1zpv-a1-m1-cB 81 81 1.0000 1.0000 1.0000 7.24e-53 1zpv-a1-m1-cB_1zpv-a1-m1-cA
5 3w7b-a1-m2-cB 285 38 0.1975 0.0561 0.4211 0.20 3w7b-a1-m1-cB_3w7b-a1-m2-cB, 3w7b-a1-m2-cA_3w7b-a1-m2-cB
6 3w7b-a1-m2-cA 285 38 0.1975 0.0561 0.4211 0.20 3w7b-a1-m2-cA_3w7b-a1-m2-cB
7 3w7b-a1-m1-cB 285 38 0.1975 0.0561 0.4211 0.20 3w7b-a1-m1-cB_3w7b-a1-m2-cB
8 1u8s-a1-m1-cB 172 64 0.2222 0.1047 0.2812 1.1 1u8s-a1-m1-cA_1u8s-a1-m1-cB
9 1u8s-a1-m1-cA 171 64 0.2222 0.1053 0.2812 1.2 1u8s-a1-m1-cA_1u8s-a1-m1-cB
10 4xtr-a1-m1-cA 305 36 0.1605 0.0426 0.3611 3.1 4xtr-a1-m1-cA_4xtr-a1-m1-cB
11 5bwk-a1-m1-cP 304 29 0.1481 0.0395 0.4138 4.8 5bwk-a1-m1-cC_5bwk-a1-m1-cP, 5bwk-a1-m1-cM_5bwk-a1-m1-cP, 5bwk-a1-m1-cO_5bwk-a1-m1-cP
12 5bwk-a1-m1-cO 304 29 0.1481 0.0395 0.4138 4.8 5bwk-a1-m1-cO_5bwk-a1-m1-cP
13 5bwk-a1-m1-cM 304 29 0.1481 0.0395 0.4138 4.8 5bwk-a1-m1-cC_5bwk-a1-m1-cM, 5bwk-a1-m1-cM_5bwk-a1-m1-cP
14 5bwk-a1-m1-cC 304 29 0.1481 0.0395 0.4138 4.8 5bwk-a1-m1-cC_5bwk-a1-m1-cM, 5bwk-a1-m1-cC_5bwk-a1-m1-cP
15 4xvu-a1-m1-cH 311 29 0.1481 0.0386 0.4138 5.5 4xvu-a1-m1-cG_4xvu-a1-m1-cH

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Reference:
Jacob Schwartz et al.

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