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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
AKDKEFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGETPPPQTDFGKIF
TILYIFIGIGLVFGFIHKLAVNVQLPSILSNLVPR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3k0g-a2-m4-cB 95 95 1.0000 1.0000 1.0000 9.10e-63 3k0g-a2-m2-cB_3k0g-a2-m4-cB
2 3k0g-a2-m2-cB 95 95 1.0000 1.0000 1.0000 9.10e-63 3k0g-a2-m2-cB_3k0g-a2-m4-cB
3 2q67-a1-m2-cA 104 85 0.8421 0.7692 0.9412 2.76e-49 2q67-a1-m2-cB_2q67-a1-m2-cA
4 2q67-a1-m2-cB 103 84 0.8316 0.7670 0.9405 1.05e-48 2q67-a1-m2-cB_2q67-a1-m2-cA
5 7rhs-a1-m1-cC 454 42 0.2000 0.0419 0.4524 6.86e-05 7rhs-a1-m1-cB_7rhs-a1-m1-cC
6 7rhs-a1-m1-cB 453 42 0.2000 0.0419 0.4524 6.93e-05 7rhs-a1-m1-cB_7rhs-a1-m1-cC
7 4xdl-a1-m1-cA 261 63 0.2526 0.0920 0.3810 0.010 4xdl-a1-m1-cB_4xdl-a1-m1-cA
8 4xdl-a1-m1-cA 261 49 0.1895 0.0690 0.3673 0.091 4xdl-a1-m1-cB_4xdl-a1-m1-cA
9 4xdl-a1-m1-cB 257 63 0.2526 0.0934 0.3810 0.010 4xdl-a1-m1-cB_4xdl-a1-m1-cA
10 4xdl-a1-m1-cB 257 49 0.1895 0.0700 0.3673 0.094 4xdl-a1-m1-cB_4xdl-a1-m1-cA
11 6rv2-a1-m1-cB 258 40 0.1579 0.0581 0.3750 0.015 6rv2-a1-m1-cA_6rv2-a1-m1-cB
12 6rv2-a1-m1-cA 254 40 0.1579 0.0591 0.3750 0.015 6rv2-a1-m1-cA_6rv2-a1-m1-cB
13 6pis-a1-m1-cA 235 62 0.2421 0.0979 0.3710 0.021 6pis-a1-m1-cA_6pis-a1-m1-cB
14 6pis-a1-m1-cA 235 37 0.1474 0.0596 0.3784 5.9 6pis-a1-m1-cA_6pis-a1-m1-cB
15 6cq9-a1-m1-cA 276 27 0.1263 0.0435 0.4444 0.037 6cq9-a1-m1-cA_6cq9-a1-m1-cB
16 6cq9-a1-m1-cA 276 62 0.2316 0.0797 0.3548 0.055 6cq9-a1-m1-cA_6cq9-a1-m1-cB
17 6cq9-a1-m1-cB 282 27 0.1263 0.0426 0.4444 0.037 6cq9-a1-m1-cA_6cq9-a1-m1-cB
18 6cq9-a1-m1-cB 282 63 0.2316 0.0780 0.3492 0.056 6cq9-a1-m1-cA_6cq9-a1-m1-cB
19 2a0l-a1-m2-cB 214 78 0.3053 0.1355 0.3718 0.066 2a0l-a1-m2-cA_2a0l-a1-m2-cB
20 2a0l-a1-m2-cA 214 78 0.3053 0.1355 0.3718 0.066 2a0l-a1-m2-cA_2a0l-a1-m2-cB
21 1orq-a2-m8-cC 223 78 0.3053 0.1300 0.3718 0.072 1orq-a2-m6-cC_1orq-a2-m8-cC
22 1orq-a2-m6-cC 223 78 0.3053 0.1300 0.3718 0.072 1orq-a2-m6-cC_1orq-a2-m8-cC
23 6uwm-a1-m1-cD 221 78 0.3053 0.1312 0.3718 0.074 6uwm-a1-m1-cC_6uwm-a1-m1-cD
24 6uwm-a1-m1-cC 221 78 0.3053 0.1312 0.3718 0.074 6uwm-a1-m1-cC_6uwm-a1-m1-cD
25 5v4s-a1-m1-cD 387 47 0.1895 0.0465 0.3830 0.075 5v4s-a1-m1-cC_5v4s-a1-m1-cD
26 5v4s-a1-m1-cC 387 47 0.1895 0.0465 0.3830 0.075 5v4s-a1-m1-cC_5v4s-a1-m1-cD
27 6pis-a1-m1-cB 239 42 0.1895 0.0753 0.4286 0.12 6pis-a1-m1-cA_6pis-a1-m1-cB
28 6pis-a1-m1-cB 239 37 0.1474 0.0586 0.3784 7.0 6pis-a1-m1-cA_6pis-a1-m1-cB
29 8de7-a1-m1-cB 263 63 0.2211 0.0798 0.3333 0.13 8de7-a1-m1-cA_8de7-a1-m1-cB
30 8de7-a1-m1-cB 263 27 0.1053 0.0380 0.3704 0.62 8de7-a1-m1-cA_8de7-a1-m1-cB
31 8de7-a1-m1-cA 263 63 0.2211 0.0798 0.3333 0.13 8de7-a1-m1-cA_8de7-a1-m1-cB
32 8de7-a1-m1-cA 263 27 0.1053 0.0380 0.3704 0.66 8de7-a1-m1-cA_8de7-a1-m1-cB
33 7cr2-a1-m1-cD 251 37 0.1474 0.0558 0.3784 0.13 7cr2-a1-m1-cC_7cr2-a1-m1-cD
34 7cr2-a1-m1-cC 251 37 0.1474 0.0558 0.3784 0.13 7cr2-a1-m1-cC_7cr2-a1-m1-cD
35 4wfh-a1-m1-cB 243 70 0.2000 0.0782 0.2714 0.28 4wfh-a1-m1-cB_4wfh-a1-m1-cA
36 4wfh-a1-m1-cB 243 36 0.1474 0.0576 0.3889 2.4 4wfh-a1-m1-cB_4wfh-a1-m1-cA
37 4wfh-a1-m1-cA 253 70 0.2000 0.0751 0.2714 0.32 4wfh-a1-m1-cB_4wfh-a1-m1-cA
38 4wfh-a1-m1-cA 253 37 0.1474 0.0553 0.3784 2.3 4wfh-a1-m1-cB_4wfh-a1-m1-cA
39 3um7-a1-m1-cA 259 70 0.2000 0.0734 0.2714 0.33 3um7-a1-m1-cB_3um7-a1-m1-cA
40 3um7-a1-m1-cA 259 37 0.1474 0.0541 0.3784 1.9 3um7-a1-m1-cB_3um7-a1-m1-cA
41 3um7-a1-m1-cB 244 70 0.2000 0.0779 0.2714 0.40 3um7-a1-m1-cB_3um7-a1-m1-cA
42 3um7-a1-m1-cB 244 36 0.1474 0.0574 0.3889 1.8 3um7-a1-m1-cB_3um7-a1-m1-cA
43 7xuf-a1-m1-cC 476 102 0.2947 0.0588 0.2745 0.50 7xuf-a1-m1-cA_7xuf-a1-m1-cC
44 7xuf-a1-m1-cA 476 102 0.2947 0.0588 0.2745 0.50 7xuf-a1-m1-cA_7xuf-a1-m1-cC
45 7f0j-a1-m1-cH 386 92 0.2632 0.0648 0.2717 0.51 7f0j-a1-m1-cF_7f0j-a1-m1-cH
46 7f0j-a1-m1-cF 386 92 0.2632 0.0648 0.2717 0.51 7f0j-a1-m1-cF_7f0j-a1-m1-cH
47 4h33-a1-m4-cA 91 70 0.2211 0.2308 0.3000 0.99 4h33-a1-m2-cA_4h33-a1-m4-cA
48 4h33-a1-m2-cA 91 70 0.2211 0.2308 0.3000 0.99 4h33-a1-m2-cA_4h33-a1-m4-cA
49 3ukm-a2-m1-cD 252 37 0.1684 0.0635 0.4324 1.6 3ukm-a2-m1-cC_3ukm-a2-m1-cD
50 3ukm-a2-m1-cC 252 37 0.1684 0.0635 0.4324 1.6 3ukm-a2-m1-cC_3ukm-a2-m1-cD
51 7ukd-a1-m1-cC 259 91 0.2632 0.0965 0.2747 4.5 7ukd-a1-m1-cA_7ukd-a1-m1-cC
52 7ukd-a1-m1-cA 259 91 0.2632 0.0965 0.2747 4.5 7ukd-a1-m1-cA_7ukd-a1-m1-cC
53 7e7z-a1-m1-cD 248 91 0.2632 0.1008 0.2747 5.5 7e7z-a1-m1-cC_7e7z-a1-m1-cD
54 7e7z-a1-m1-cC 248 91 0.2632 0.1008 0.2747 5.5 7e7z-a1-m1-cC_7e7z-a1-m1-cD
55 2gi3-a1-m2-cA 441 50 0.2105 0.0454 0.4000 8.7 2gi3-a1-m1-cA_2gi3-a1-m2-cA
56 2gi3-a1-m1-cA 441 50 0.2105 0.0454 0.4000 8.7 2gi3-a1-m1-cA_2gi3-a1-m2-cA
57 7tcp-a1-m1-cG 341 26 0.1474 0.0411 0.5385 9.2 7tcp-a1-m1-cE_7tcp-a1-m1-cG
58 7tcp-a1-m1-cE 341 26 0.1474 0.0411 0.5385 9.2 7tcp-a1-m1-cE_7tcp-a1-m1-cG

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Reference:
Jacob Schwartz et al.

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