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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=71)
AKECRCQCIKTYSKPFHPKFIKELRVIESGPCCANTEIIVKLSDGRELCLDPKENWVQRV
VEKFLKRAENS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1qe6-a3-m1-cD 72 71 1.0000 0.9861 1.0000 4.30e-48 1qe6-a3-m2-cB_1qe6-a3-m1-cD
2 1qe6-a3-m2-cB 71 71 1.0000 1.0000 1.0000 4.99e-48 1qe6-a3-m2-cA_1qe6-a3-m2-cB, 1qe6-a3-m2-cB_1qe6-a3-m1-cD
3 1qe6-a3-m2-cA 68 68 0.9577 1.0000 1.0000 5.10e-46 1qe6-a3-m2-cA_1qe6-a3-m2-cB
4 1rod-a1-m1-cB 72 65 0.7606 0.7500 0.8308 3.51e-35 1rod-a1-m1-cA_1rod-a1-m1-cB
5 1rod-a1-m1-cA 72 65 0.7606 0.7500 0.8308 3.51e-35 1rod-a1-m1-cA_1rod-a1-m1-cB
6 1msh-a1-m1-cB 72 65 0.4085 0.4028 0.4462 3.75e-15 1msh-a1-m1-cA_1msh-a1-m1-cB
7 1msh-a1-m1-cA 72 65 0.4085 0.4028 0.4462 3.75e-15 1msh-a1-m1-cA_1msh-a1-m1-cB
8 6wzk-a1-m1-cF 64 65 0.3944 0.4375 0.4308 3.24e-14 6wzk-a1-m1-cE_6wzk-a1-m1-cF
9 6wzk-a1-m1-cE 64 65 0.3944 0.4375 0.4308 3.24e-14 6wzk-a1-m1-cE_6wzk-a1-m1-cF
10 1mi2-a1-m1-cB 73 69 0.4085 0.3973 0.4203 5.31e-14 1mi2-a1-m1-cA_1mi2-a1-m1-cB
11 1mi2-a1-m1-cA 73 69 0.4085 0.3973 0.4203 5.31e-14 1mi2-a1-m1-cA_1mi2-a1-m1-cB
12 3n52-a3-m1-cB 71 69 0.4085 0.4085 0.4203 5.83e-14 3n52-a3-m1-cD_3n52-a3-m1-cB
13 2mgs-a1-m1-cB 71 64 0.3521 0.3521 0.3906 5.89e-14 2mgs-a1-m1-cA_2mgs-a1-m1-cB
14 2mgs-a1-m1-cA 71 64 0.3521 0.3521 0.3906 5.89e-14 2mgs-a1-m1-cA_2mgs-a1-m1-cB
15 3n52-a3-m1-cD 70 68 0.4085 0.4143 0.4265 6.28e-14 3n52-a3-m1-cC_3n52-a3-m1-cD, 3n52-a3-m1-cD_3n52-a3-m1-cB
16 1pfn-a1-m1-cD 68 65 0.3803 0.3971 0.4154 7.61e-14 1pfn-a1-m1-cB_1pfn-a1-m1-cD
17 1pfn-a1-m1-cC 68 65 0.3803 0.3971 0.4154 7.61e-14 1pfn-a1-m1-cB_1pfn-a1-m1-cC
18 1pfn-a1-m1-cB 68 65 0.3803 0.3971 0.4154 7.61e-14 1pfn-a1-m1-cB_1pfn-a1-m1-cC, 1pfn-a1-m1-cB_1pfn-a1-m1-cD
19 1tvx-a1-m1-cD 71 63 0.4225 0.4225 0.4762 1.28e-13 1tvx-a1-m1-cB_1tvx-a1-m1-cD, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
20 1tvx-a1-m1-cB 71 63 0.4225 0.4225 0.4762 1.28e-13 1tvx-a1-m1-cB_1tvx-a1-m1-cD
21 3n52-a3-m1-cC 67 67 0.3944 0.4179 0.4179 2.64e-13 3n52-a3-m1-cC_3n52-a3-m1-cD
22 1tvx-a1-m1-cC 64 61 0.4085 0.4531 0.4754 3.94e-13 1tvx-a1-m1-cA_1tvx-a1-m1-cC, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
23 1tvx-a1-m1-cA 64 61 0.4085 0.4531 0.4754 3.94e-13 1tvx-a1-m1-cA_1tvx-a1-m1-cC
24 6wzj-a1-m1-cE 63 63 0.3662 0.4127 0.4127 4.38e-13 6wzj-a1-m1-cF_6wzj-a1-m1-cE
25 6wzj-a1-m1-cF 59 63 0.3380 0.4068 0.3810 9.70e-11 6wzj-a1-m1-cF_6wzj-a1-m1-cE
26 4r9y-a1-m1-cD 65 63 0.3099 0.3385 0.3492 2.98e-10 4r9y-a1-m1-cB_4r9y-a1-m1-cD
27 4r9y-a1-m1-cB 65 63 0.3099 0.3385 0.3492 2.98e-10 4r9y-a1-m1-cB_4r9y-a1-m1-cD
28 4r9w-a1-m2-cB 64 63 0.3099 0.3438 0.3492 3.04e-10 4r9w-a1-m1-cA_4r9w-a1-m2-cB, 4r9w-a1-m2-cA_4r9w-a1-m2-cB
29 1f9q-a1-m1-cC 62 61 0.3099 0.3548 0.3607 3.58e-10 1f9q-a1-m1-cB_1f9q-a1-m1-cC
30 1f9q-a1-m1-cB 62 61 0.3099 0.3548 0.3607 3.58e-10 1f9q-a1-m1-cB_1f9q-a1-m1-cC
31 4r9w-a1-m2-cA 62 61 0.3099 0.3548 0.3607 3.74e-10 4r9w-a1-m2-cA_4r9w-a1-m2-cB
32 4r9w-a1-m1-cA 62 61 0.3099 0.3548 0.3607 3.74e-10 4r9w-a1-m1-cA_4r9w-a1-m2-cB
33 4hsv-a1-m1-cD 65 63 0.2958 0.3231 0.3333 3.22e-09 4hsv-a1-m1-cA_4hsv-a1-m1-cD, 4hsv-a1-m1-cC_4hsv-a1-m1-cD
34 4hsv-a1-m1-cA 65 63 0.2958 0.3231 0.3333 3.22e-09 4hsv-a1-m1-cA_4hsv-a1-m1-cD
35 4hsv-a1-m1-cC 59 58 0.2817 0.3390 0.3448 1.50e-08 4hsv-a1-m1-cC_4hsv-a1-m1-cD
36 1plf-a1-m1-cD 65 64 0.2958 0.3231 0.3281 2.77e-08 1plf-a1-m1-cA_1plf-a1-m1-cD, 1plf-a1-m1-cB_1plf-a1-m1-cD, 1plf-a1-m1-cC_1plf-a1-m1-cD
37 1plf-a1-m1-cB 65 64 0.2958 0.3231 0.3281 2.77e-08 1plf-a1-m1-cB_1plf-a1-m1-cD
38 1plf-a1-m1-cC 63 62 0.2958 0.3333 0.3387 3.59e-08 1plf-a1-m1-cA_1plf-a1-m1-cC, 1plf-a1-m1-cC_1plf-a1-m1-cD
39 1plf-a1-m1-cA 63 62 0.2958 0.3333 0.3387 3.59e-08 1plf-a1-m1-cA_1plf-a1-m1-cC, 1plf-a1-m1-cA_1plf-a1-m1-cD
40 1o7y-a1-m1-cA 67 63 0.2254 0.2388 0.2540 7.29e-05 1o7y-a1-m1-cC_1o7y-a1-m1-cA
41 1o7y-a1-m1-cD 62 59 0.2254 0.2581 0.2712 1.01e-04 1o7y-a1-m1-cD_1o7y-a1-m1-cC
42 1o7y-a1-m1-cC 63 59 0.2254 0.2540 0.2712 1.04e-04 1o7y-a1-m1-cB_1o7y-a1-m1-cC, 1o7y-a1-m1-cC_1o7y-a1-m1-cA, 1o7y-a1-m1-cD_1o7y-a1-m1-cC
43 4uai-a1-m1-cA 68 48 0.2394 0.2500 0.3542 2.91e-04 4uai-a1-m1-cB_4uai-a1-m1-cA
44 4uai-a1-m1-cB 67 48 0.2394 0.2537 0.3542 3.05e-04 4uai-a1-m1-cB_4uai-a1-m1-cA
45 3hp3-a3-m1-cD 64 46 0.2394 0.2656 0.3696 3.93e-04 3hp3-a3-m1-cD_3hp3-a3-m1-cF
46 3hp3-a3-m1-cF 65 46 0.2394 0.2615 0.3696 4.28e-04 3hp3-a3-m1-cD_3hp3-a3-m1-cF
47 1o7y-a1-m1-cB 62 62 0.2254 0.2581 0.2581 5.47e-04 1o7y-a1-m1-cB_1o7y-a1-m1-cC
48 2r3z-a1-m1-cA 68 65 0.2535 0.2647 0.2769 6.92e-04 2r3z-a1-m1-cB_2r3z-a1-m1-cA, 2r3z-a1-m1-cD_2r3z-a1-m1-cA
49 2hci-a1-m1-cB 65 63 0.2394 0.2615 0.2698 0.001 2hci-a1-m1-cB_2hci-a1-m1-cA
50 2hci-a1-m1-cA 68 63 0.2394 0.2500 0.2698 0.001 2hci-a1-m1-cB_2hci-a1-m1-cA
51 4mhe-a2-m1-cB 69 57 0.2394 0.2464 0.2982 0.001 4mhe-a2-m1-cC_4mhe-a2-m1-cB
52 4mhe-a2-m1-cC 61 46 0.2113 0.2459 0.3261 0.001 4mhe-a2-m1-cC_4mhe-a2-m1-cB
53 2ra4-a4-m4-cB 65 30 0.1690 0.1846 0.4000 0.004 2ra4-a4-m2-cB_2ra4-a4-m4-cB
54 2ra4-a4-m2-cB 65 30 0.1690 0.1846 0.4000 0.004 2ra4-a4-m2-cB_2ra4-a4-m4-cB
55 2ra4-a2-m4-cB 65 30 0.1690 0.1846 0.4000 0.004 2ra4-a2-m4-cA_2ra4-a2-m4-cB
56 2ra4-a2-m4-cA 65 30 0.1690 0.1846 0.4000 0.004 2ra4-a2-m4-cA_2ra4-a2-m4-cB
57 2r3z-a1-m1-cD 64 63 0.2394 0.2656 0.2698 0.006 2r3z-a1-m1-cD_2r3z-a1-m1-cA
58 2r3z-a1-m1-cB 67 63 0.2394 0.2537 0.2698 0.007 2r3z-a1-m1-cB_2r3z-a1-m1-cA
59 1esr-a1-m2-cA 75 26 0.1690 0.1600 0.4615 0.020 1esr-a1-m1-cA_1esr-a1-m2-cA
60 1esr-a1-m1-cA 75 26 0.1690 0.1600 0.4615 0.020 1esr-a1-m1-cA_1esr-a1-m2-cA
61 7s5a-a1-m1-cB 76 26 0.1690 0.1579 0.4615 0.020 7s5a-a1-m1-cA_7s5a-a1-m1-cB
62 7s5a-a1-m1-cA 73 26 0.1690 0.1644 0.4615 0.021 7s5a-a1-m1-cA_7s5a-a1-m1-cB
63 1f2l-a1-m1-cD 70 41 0.1690 0.1714 0.2927 0.041 1f2l-a1-m1-cA_1f2l-a1-m1-cD, 1f2l-a1-m1-cC_1f2l-a1-m1-cD
64 5eki-a7-m1-cA 72 61 0.2535 0.2500 0.2951 0.058 5eki-a7-m1-cF_5eki-a7-m1-cA
65 5eki-a7-m1-cF 70 61 0.2535 0.2571 0.2951 0.061 5eki-a7-m1-cF_5eki-a7-m1-cA
66 1ncv-a1-m1-cB 76 38 0.1549 0.1447 0.2895 0.10 1ncv-a1-m1-cA_1ncv-a1-m1-cB
67 1ncv-a1-m1-cA 76 38 0.1549 0.1447 0.2895 0.10 1ncv-a1-m1-cA_1ncv-a1-m1-cB
68 1f2l-a1-m1-cC 64 37 0.1549 0.1719 0.2973 0.12 1f2l-a1-m1-cC_1f2l-a1-m1-cD
69 1f2l-a1-m1-cA 64 37 0.1549 0.1719 0.2973 0.12 1f2l-a1-m1-cA_1f2l-a1-m1-cD
70 4oij-a1-m1-cB 71 27 0.1690 0.1690 0.4444 0.24 4oij-a1-m1-cA_4oij-a1-m1-cB
71 4oij-a1-m1-cA 71 27 0.1690 0.1690 0.4444 0.24 4oij-a1-m1-cA_4oij-a1-m1-cB
72 2vxw-a1-m1-cD 62 57 0.1972 0.2258 0.2456 0.31 2vxw-a1-m1-cD_2vxw-a1-m1-cA, 2vxw-a1-m1-cD_2vxw-a1-m1-cB
73 6log-a1-m2-cA 63 57 0.1972 0.2222 0.2456 0.36 6log-a1-m1-cA_6log-a1-m2-cA
74 6log-a1-m1-cA 63 57 0.1972 0.2222 0.2456 0.36 6log-a1-m1-cA_6log-a1-m2-cA
75 6aez-a1-m3-cA 64 57 0.1972 0.2188 0.2456 0.40 6aez-a1-m2-cA_6aez-a1-m3-cA
76 6aez-a1-m2-cA 64 57 0.1972 0.2188 0.2456 0.40 6aez-a1-m2-cA_6aez-a1-m3-cA
77 5l2u-a2-m2-cI 65 57 0.1972 0.2154 0.2456 0.41 5l2u-a2-m2-cG_5l2u-a2-m2-cI
78 5dnf-a1-m1-cG 65 57 0.1972 0.2154 0.2456 0.41 5dnf-a1-m1-cE_5dnf-a1-m1-cG
79 5dnf-a1-m1-cE 65 57 0.1972 0.2154 0.2456 0.41 5dnf-a1-m1-cE_5dnf-a1-m1-cG
80 5dnf-a1-m1-cD 65 57 0.1972 0.2154 0.2456 0.41 5dnf-a1-m1-cA_5dnf-a1-m1-cD
81 5dnf-a1-m1-cA 65 57 0.1972 0.2154 0.2456 0.41 5dnf-a1-m1-cA_5dnf-a1-m1-cD
82 2vxw-a1-m1-cB 69 57 0.1972 0.2029 0.2456 0.41 2vxw-a1-m1-cD_2vxw-a1-m1-cB
83 2vxw-a1-m1-cA 69 57 0.1972 0.2029 0.2456 0.41 2vxw-a1-m1-cD_2vxw-a1-m1-cA
84 5l2u-a2-m2-cH 64 57 0.1972 0.2188 0.2456 0.43 5l2u-a2-m2-cG_5l2u-a2-m2-cH
85 5l2u-a2-m2-cG 64 57 0.1972 0.2188 0.2456 0.43 5l2u-a2-m2-cG_5l2u-a2-m2-cH, 5l2u-a2-m2-cG_5l2u-a2-m2-cI
86 5yam-a1-m1-cB 69 29 0.1127 0.1159 0.2759 0.51 5yam-a1-m1-cA_5yam-a1-m1-cB
87 5yam-a1-m1-cA 69 29 0.1127 0.1159 0.2759 0.51 5yam-a1-m1-cA_5yam-a1-m1-cB
88 2l9h-a1-m1-cC 67 57 0.1972 0.2090 0.2456 0.52 2l9h-a1-m1-cA_2l9h-a1-m1-cC
89 2l9h-a1-m1-cA 67 57 0.1972 0.2090 0.2456 0.52 2l9h-a1-m1-cA_2l9h-a1-m1-cC
90 1hrj-a1-m1-cB 68 57 0.1972 0.2059 0.2456 0.52 1hrj-a1-m1-cA_1hrj-a1-m1-cB
91 1hrj-a1-m1-cA 68 57 0.1972 0.2059 0.2456 0.52 1hrj-a1-m1-cA_1hrj-a1-m1-cB
92 2fj2-a2-m1-cC 68 32 0.1127 0.1176 0.2500 0.67 2fj2-a2-m1-cD_2fj2-a2-m1-cC
93 2fj2-a2-m1-cD 67 32 0.1127 0.1194 0.2500 0.69 2fj2-a2-m1-cD_2fj2-a2-m1-cC
94 5ltl-a1-m1-cA 67 55 0.2113 0.2239 0.2727 1.1 5ltl-a1-m1-cA_5ltl-a1-m1-cB
95 5ltl-a1-m1-cB 68 55 0.2113 0.2206 0.2727 1.1 5ltl-a1-m1-cA_5ltl-a1-m1-cB
96 1ym5-a1-m2-cA 294 50 0.2254 0.0544 0.3200 2.5 1ym5-a1-m1-cA_1ym5-a1-m2-cA
97 1ym5-a1-m1-cA 294 50 0.2254 0.0544 0.3200 2.5 1ym5-a1-m1-cA_1ym5-a1-m2-cA
98 1nr4-a5-m3-cF 66 39 0.1831 0.1970 0.3333 7.0 1nr4-a5-m3-cF_1nr4-a5-m3-cE
99 1nr4-a5-m3-cE 69 39 0.1831 0.1884 0.3333 7.5 1nr4-a5-m1-cA_1nr4-a5-m3-cE, 1nr4-a5-m3-cF_1nr4-a5-m3-cE, 1nr4-a5-m4-cG_1nr4-a5-m3-cE
100 2jp1-a1-m1-cB 60 17 0.1127 0.1333 0.4706 8.7 2jp1-a1-m1-cA_2jp1-a1-m1-cB
101 2jp1-a1-m1-cA 60 17 0.1127 0.1333 0.4706 8.7 2jp1-a1-m1-cA_2jp1-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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