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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=18)
AKENALLRYLLDKDDTKD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1xls-a5-m3-cP 18 18 1.0000 1.0000 1.0000 7.93e-06 1xls-a5-m1-cM_1xls-a5-m3-cP
2 1xls-a5-m1-cM 18 18 1.0000 1.0000 1.0000 7.93e-06 1xls-a5-m1-cM_1xls-a5-m3-cP
3 1yok-a1-m1-cC 14 14 0.7778 1.0000 1.0000 0.005 1yok-a1-m1-cB_1yok-a1-m1-cC
4 4wg0-a1-m1-cM 13 13 0.6111 0.8462 0.8462 0.40 4wg0-a1-m1-cL_4wg0-a1-m1-cM
5 4wg0-a1-m1-cL 13 13 0.6111 0.8462 0.8462 0.40 4wg0-a1-m1-cL_4wg0-a1-m1-cM
6 4wg0-a1-m1-cI 13 13 0.6111 0.8462 0.8462 0.40 4wg0-a1-m1-cH_4wg0-a1-m1-cI
7 4dos-a1-m1-cC 11 11 0.6111 1.0000 1.0000 0.48 4dos-a1-m1-cB_4dos-a1-m1-cC
8 1yok-a1-m1-cB 11 11 0.6111 1.0000 1.0000 0.59 1yok-a1-m1-cB_1yok-a1-m1-cC
9 4wg0-a1-m1-cH 12 12 0.5556 0.8333 0.8333 2.1 4wg0-a1-m1-cH_4wg0-a1-m1-cI
10 4dos-a1-m1-cB 10 10 0.5556 1.0000 1.0000 3.0 4dos-a1-m1-cB_4dos-a1-m1-cC
11 4hz4-a1-m2-cA 215 18 0.4444 0.0372 0.4444 8.1 4hz4-a1-m1-cA_4hz4-a1-m2-cA
12 4hz4-a1-m1-cA 215 18 0.4444 0.0372 0.4444 8.1 4hz4-a1-m1-cA_4hz4-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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