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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
AKGYWIAQVDVRDSERYKDYVSTAKPAFERFGANFLARGGSVTELEGTARARNVVIEFPS
VQHAIDCYNSPEYQAAAKIRQEVADAEIVEGIG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2fiu-a1-m1-cB 93 93 1.0000 1.0000 1.0000 5.38e-65 2fiu-a1-m1-cA_2fiu-a1-m1-cB
2 2fiu-a1-m1-cA 93 93 1.0000 1.0000 1.0000 5.38e-65 2fiu-a1-m1-cA_2fiu-a1-m1-cB
3 3lo3-a1-m1-cB 93 81 0.2688 0.2688 0.3086 1.69e-06 3lo3-a1-m1-cA_3lo3-a1-m1-cB
4 3lo3-a1-m1-cA 93 81 0.2688 0.2688 0.3086 1.69e-06 3lo3-a1-m1-cA_3lo3-a1-m1-cB
5 3mue-a2-m1-cD 284 85 0.2796 0.0915 0.3059 1.8 3mue-a2-m1-cC_3mue-a2-m1-cD
6 3mue-a2-m1-cC 283 85 0.2796 0.0919 0.3059 1.8 3mue-a2-m1-cC_3mue-a2-m1-cD
7 6dwv-a2-m2-cD 339 35 0.1183 0.0324 0.3143 4.5 6dwv-a2-m1-cA_6dwv-a2-m2-cD
8 6dwv-a2-m1-cA 339 35 0.1183 0.0324 0.3143 4.5 6dwv-a2-m1-cA_6dwv-a2-m2-cD
9 3guz-a1-m1-cA 165 29 0.1290 0.0727 0.4138 4.8 3guz-a1-m1-cA_3guz-a1-m1-cB
10 5zfm-a1-m1-cC 248 44 0.1398 0.0524 0.2955 5.0 5zfm-a1-m1-cB_5zfm-a1-m1-cC
11 5zfm-a1-m1-cB 248 44 0.1398 0.0524 0.2955 5.0 5zfm-a1-m1-cB_5zfm-a1-m1-cC
12 5zi0-a1-m1-cD 248 44 0.1398 0.0524 0.2955 5.1 5zi0-a1-m1-cC_5zi0-a1-m1-cD
13 5zi0-a1-m1-cC 248 44 0.1398 0.0524 0.2955 5.1 5zi0-a1-m1-cC_5zi0-a1-m1-cD
14 3guz-a1-m1-cB 167 29 0.1290 0.0719 0.4138 5.3 3guz-a1-m1-cA_3guz-a1-m1-cB
15 3q12-a1-m1-cB 284 28 0.1183 0.0387 0.3929 7.7 3q12-a1-m1-cB_3q12-a1-m1-cA
16 3q12-a1-m1-cA 285 28 0.1183 0.0386 0.3929 7.8 3q12-a1-m1-cB_3q12-a1-m1-cA
17 4z6x-a1-m2-cA 309 46 0.1720 0.0518 0.3478 8.3 4z6x-a1-m1-cA_4z6x-a1-m2-cA
18 4z6x-a1-m1-cA 309 46 0.1720 0.0518 0.3478 8.3 4z6x-a1-m1-cA_4z6x-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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