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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=34)
AKLSEAELHDKIAALEEEKAELFEKLDKVEEEHK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5i0q-a1-m2-cA 34 34 1.0000 1.0000 1.0000 6.19e-15 5i0q-a1-m1-cA_5i0q-a1-m2-cA
2 5i0q-a1-m1-cA 34 34 1.0000 1.0000 1.0000 6.19e-15 5i0q-a1-m1-cA_5i0q-a1-m2-cA
3 5hzp-a1-m1-cC 71 30 0.3529 0.1690 0.4000 2.0 5hzp-a1-m1-cA_5hzp-a1-m1-cC
4 5hzp-a1-m1-cA 71 30 0.3529 0.1690 0.4000 2.0 5hzp-a1-m1-cA_5hzp-a1-m1-cC
5 7tge-a1-m1-cC 805 26 0.2941 0.0124 0.3846 3.6 7tge-a1-m1-cC_7tge-a1-m1-cA, 7tge-a1-m1-cC_7tge-a1-m1-cB
6 7tge-a1-m1-cB 842 26 0.2941 0.0119 0.3846 3.6 7tge-a1-m1-cC_7tge-a1-m1-cB
7 7tei-a1-m1-cC 983 26 0.2941 0.0102 0.3846 3.6 7tei-a1-m1-cC_7tei-a1-m1-cA, 7tei-a1-m1-cC_7tei-a1-m1-cB
8 7tei-a1-m1-cA 1019 26 0.2941 0.0098 0.3846 3.6 7tei-a1-m1-cC_7tei-a1-m1-cA
9 7tge-a1-m1-cA 1030 26 0.2941 0.0097 0.3846 3.6 7tge-a1-m1-cC_7tge-a1-m1-cA
10 7tei-a1-m1-cB 1042 26 0.2941 0.0096 0.3846 3.6 7tei-a1-m1-cC_7tei-a1-m1-cB
11 4eg0-a1-m1-cA 288 17 0.2941 0.0347 0.5882 6.8 4eg0-a1-m1-cA_4eg0-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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