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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=51)
AKYFQIDELTLNALRITTIESLTPEQRLELIKAHLLNIKTPSDDNEPWDEF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5kko-a1-m3-cC 53 51 1.0000 0.9623 1.0000 4.50e-32 5kko-a1-m2-cE_5kko-a1-m3-cC, 5kko-a1-m3-cB_5kko-a1-m3-cC
2 5kko-a1-m1-cA 51 51 1.0000 1.0000 1.0000 5.29e-32 5kko-a1-m1-cA_5kko-a1-m2-cE, 5kko-a1-m1-cA_5kko-a1-m3-cB
3 5kko-a1-m2-cE 52 51 1.0000 0.9808 1.0000 5.60e-32 5kko-a1-m1-cA_5kko-a1-m2-cE, 5kko-a1-m2-cE_5kko-a1-m3-cC
4 5kko-a1-m3-cB 52 50 0.9804 0.9615 1.0000 4.42e-31 5kko-a1-m1-cA_5kko-a1-m3-cB, 5kko-a1-m3-cB_5kko-a1-m3-cC
5 3kvo-a3-m1-cA 273 71 0.4118 0.0769 0.2958 3.0 3kvo-a3-m1-cA_3kvo-a3-m1-cB
6 3kvo-a3-m1-cB 276 71 0.4118 0.0761 0.2958 3.3 3kvo-a3-m1-cA_3kvo-a3-m1-cB
7 3lkv-a1-m2-cA 294 26 0.2353 0.0408 0.4615 7.8 3lkv-a1-m1-cA_3lkv-a1-m2-cA
8 3lkv-a1-m1-cA 294 26 0.2353 0.0408 0.4615 7.8 3lkv-a1-m1-cA_3lkv-a1-m2-cA
9 2z5f-a1-m1-cB 293 28 0.2157 0.0375 0.3929 8.5 2z5f-a1-m1-cA_2z5f-a1-m1-cB
10 2z5f-a1-m1-cA 293 28 0.2157 0.0375 0.3929 8.5 2z5f-a1-m1-cA_2z5f-a1-m1-cB
11 5mto-a1-m1-cB 107 22 0.1765 0.0841 0.4091 9.5 5mto-a1-m1-cA_5mto-a1-m1-cB
12 5mto-a1-m1-cA 107 22 0.1765 0.0841 0.4091 9.5 5mto-a1-m1-cA_5mto-a1-m1-cB
13 5fmn-a1-m2-cA 86 25 0.1765 0.1047 0.3600 9.9 5fmn-a1-m2-cA_5fmn-a1-m2-cB
14 5fmn-a1-m1-cA 86 25 0.1765 0.1047 0.3600 9.9 5fmn-a1-m1-cA_5fmn-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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