Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=88)
ALAEIRKYQRSTDLLISRMPFARLVKEVTDQFTPLRWQSMAIMALQEASEAYLVGLLEHT
NLLALHAKRITIMRKDMQLARRIRGQFI

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 2yfw-a2-m1-cE 88 88 1.0000 1.0000 1.0000 2.18e-60 2yfw-a2-m1-cC_2yfw-a2-m1-cE
2 6uph-a1-m1-cE 97 92 0.9318 0.8454 0.8913 7.34e-54 6uph-a1-m1-cA_6uph-a1-m1-cE
3 6uph-a1-m1-cA 93 91 0.9205 0.8710 0.8901 2.37e-53 6uph-a1-m1-cA_6uph-a1-m1-cE
4 2yfw-a2-m1-cC 71 74 0.8068 1.0000 0.9595 1.52e-44 2yfw-a2-m1-cC_2yfw-a2-m1-cE
5 8f86-a1-m1-cE 95 87 0.6818 0.6316 0.6897 3.05e-37 8f86-a1-m1-cE_8f86-a1-m1-cA
6 8f86-a1-m1-cA 107 87 0.6818 0.5607 0.6897 3.98e-37 8f86-a1-m1-cE_8f86-a1-m1-cA
7 5zbx-a1-m1-cA 95 86 0.6136 0.5684 0.6279 1.56e-34 5zbx-a1-m1-cA_5zbx-a1-m1-cE
8 5ay8-a1-m1-cA 97 85 0.6364 0.5773 0.6588 2.95e-33 5ay8-a1-m1-cE_5ay8-a1-m1-cA
9 5ay8-a1-m1-cE 96 85 0.6364 0.5833 0.6588 3.06e-33 5ay8-a1-m1-cE_5ay8-a1-m1-cA
10 4jjn-a1-m1-cE 96 87 0.6136 0.5625 0.6207 4.60e-33 4jjn-a1-m1-cE_4jjn-a1-m1-cA
11 7z0o-a1-m1-cC 97 87 0.6136 0.5567 0.6207 5.28e-33 7z0o-a1-m1-cA_7z0o-a1-m1-cC
12 4jjn-a1-m1-cA 98 87 0.6136 0.5510 0.6207 5.32e-33 4jjn-a1-m1-cE_4jjn-a1-m1-cA
13 7z0o-a1-m1-cA 94 86 0.6136 0.5745 0.6279 7.50e-33 7z0o-a1-m1-cA_7z0o-a1-m1-cC
14 5zbx-a1-m1-cE 101 89 0.6136 0.5347 0.6067 2.46e-32 5zbx-a1-m1-cA_5zbx-a1-m1-cE
15 7y7i-a1-m1-cE 97 88 0.6023 0.5464 0.6023 4.37e-31 7y7i-a1-m1-cE_7y7i-a1-m1-cA
16 7y7i-a1-m1-cA 102 88 0.6023 0.5196 0.6023 5.38e-31 7y7i-a1-m1-cE_7y7i-a1-m1-cA
17 6kxv-a1-m1-cA 94 87 0.6023 0.5638 0.6092 7.15e-30 6kxv-a1-m1-cA_6kxv-a1-m1-cE
18 6kxv-a1-m1-cE 95 87 0.6023 0.5579 0.6092 7.94e-30 6kxv-a1-m1-cA_6kxv-a1-m1-cE
19 7d69-a1-m1-cE 99 86 0.4773 0.4242 0.4884 5.62e-25 7d69-a1-m1-cA_7d69-a1-m1-cE
20 7d69-a1-m1-cA 90 83 0.4659 0.4556 0.4940 2.26e-24 7d69-a1-m1-cA_7d69-a1-m1-cE
21 6xwt-a1-m1-cC 74 68 0.2955 0.3514 0.3824 1.73e-09 6xwt-a1-m1-cA_6xwt-a1-m1-cC
22 6xwt-a1-m1-cA 74 68 0.2955 0.3514 0.3824 1.73e-09 6xwt-a1-m1-cA_6xwt-a1-m1-cC
23 7lv9-a1-m1-cE 102 78 0.2614 0.2255 0.2949 0.035 7lv9-a1-m1-cA_7lv9-a1-m1-cE
24 7lv9-a1-m1-cA 102 78 0.2614 0.2255 0.2949 0.035 7lv9-a1-m1-cA_7lv9-a1-m1-cE
25 1pvm-a1-m1-cB 184 57 0.1705 0.0815 0.2632 2.3 1pvm-a1-m1-cA_1pvm-a1-m1-cB
26 1pvm-a1-m1-cA 178 57 0.1705 0.0843 0.2632 2.3 1pvm-a1-m1-cA_1pvm-a1-m1-cB
27 6u9e-a1-m1-cE 583 51 0.1250 0.0189 0.2157 2.7 6u9e-a1-m1-cC_6u9e-a1-m1-cE
28 6u9e-a1-m1-cC 583 51 0.1250 0.0189 0.2157 2.7 6u9e-a1-m1-cC_6u9e-a1-m1-cE
29 6z6e-a1-m3-cC 101 17 0.1023 0.0891 0.5294 8.9 6z6e-a1-m3-cC_6z6e-a1-m3-cB
30 6z6e-a1-m3-cB 102 17 0.1023 0.0882 0.5294 9.1 6z6e-a1-m3-cC_6z6e-a1-m3-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600