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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
ALARLGRALADPTRCRILVALLDGVCYPGQLAAHLGLTRSNVSNHLSCLRGCGLVVATYE
GRQVRYALADSHLARALGELVQVVLAVDTDQPCVAER

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2jsc-a1-m1-cB 97 97 1.0000 1.0000 1.0000 1.44e-64 2jsc-a1-m1-cA_2jsc-a1-m1-cB
2 2jsc-a1-m1-cA 96 96 0.9897 1.0000 1.0000 5.81e-64 2jsc-a1-m1-cA_2jsc-a1-m1-cB
3 2lkp-a1-m1-cB 119 75 0.3196 0.2605 0.4133 1.55e-10 2lkp-a1-m1-cA_2lkp-a1-m1-cB
4 2lkp-a1-m1-cA 119 75 0.3196 0.2605 0.4133 1.55e-10 2lkp-a1-m1-cA_2lkp-a1-m1-cB
5 7p6f-a3-m3-cDDD 97 78 0.2887 0.2887 0.3590 1.70e-10 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD
6 7p6f-a3-m1-cDDD 97 78 0.2887 0.2887 0.3590 1.70e-10 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD
7 2kjb-a1-m1-cB 95 81 0.2680 0.2737 0.3210 1.75e-08 2kjb-a1-m1-cA_2kjb-a1-m1-cB
8 2kjb-a1-m1-cA 95 81 0.2680 0.2737 0.3210 1.75e-08 2kjb-a1-m1-cA_2kjb-a1-m1-cB
9 1r1v-a3-m2-cA 95 81 0.2680 0.2737 0.3210 1.75e-08 1r1v-a3-m2-cA_1r1v-a3-m2-cB
10 4ooi-a1-m1-cA 95 77 0.2990 0.3053 0.3766 2.01e-08 4ooi-a1-m1-cA_4ooi-a1-m1-cB
11 4ooi-a1-m1-cB 96 77 0.2990 0.3021 0.3766 2.12e-08 4ooi-a1-m1-cA_4ooi-a1-m1-cB
12 1r1v-a3-m2-cB 96 81 0.2680 0.2708 0.3210 2.12e-08 1r1v-a3-m2-cA_1r1v-a3-m2-cB
13 6cdb-a3-m3-cA 97 81 0.2680 0.2680 0.3210 2.21e-08 6cdb-a3-m4-cB_6cdb-a3-m3-cA
14 6cdb-a3-m4-cB 95 81 0.2680 0.2737 0.3210 2.47e-08 6cdb-a3-m2-cB_6cdb-a3-m4-cB, 6cdb-a3-m4-cB_6cdb-a3-m3-cA
15 6cdb-a3-m2-cB 95 81 0.2680 0.2737 0.3210 2.47e-08 6cdb-a3-m2-cB_6cdb-a3-m4-cB
16 2oqg-a1-m1-cB 107 65 0.2577 0.2336 0.3846 8.51e-08 2oqg-a1-m1-cA_2oqg-a1-m1-cB, 2oqg-a1-m1-cD_2oqg-a1-m1-cB
17 2oqg-a1-m1-cD 105 65 0.2577 0.2381 0.3846 9.41e-08 2oqg-a1-m1-cC_2oqg-a1-m1-cD, 2oqg-a1-m1-cD_2oqg-a1-m1-cA, 2oqg-a1-m1-cD_2oqg-a1-m1-cB
18 2oqg-a1-m1-cC 105 65 0.2577 0.2381 0.3846 9.41e-08 2oqg-a1-m1-cC_2oqg-a1-m1-cD
19 2oqg-a1-m1-cA 107 65 0.2577 0.2336 0.3846 1.16e-07 2oqg-a1-m1-cA_2oqg-a1-m1-cB, 2oqg-a1-m1-cD_2oqg-a1-m1-cA
20 4omz-a2-m1-cC 100 76 0.2577 0.2500 0.3289 5.54e-07 4omz-a2-m1-cD_4omz-a2-m1-cC
21 4omz-a2-m1-cD 98 76 0.2577 0.2551 0.3289 5.87e-07 4omz-a2-m1-cD_4omz-a2-m1-cC
22 3f6v-a1-m2-cA 96 66 0.2680 0.2708 0.3939 1.93e-06 3f6v-a1-m1-cA_3f6v-a1-m2-cA
23 3f6v-a1-m1-cA 96 66 0.2680 0.2708 0.3939 1.93e-06 3f6v-a1-m1-cA_3f6v-a1-m2-cA
24 6jmi-a1-m1-cA 100 90 0.3093 0.3000 0.3333 5.20e-06 6jmi-a1-m1-cD_6jmi-a1-m1-cA
25 6j05-a1-m1-cB 90 68 0.2784 0.3000 0.3971 1.14e-05 6j05-a1-m1-cB_6j05-a1-m1-cA
26 6j05-a1-m1-cA 101 99 0.3505 0.3366 0.3434 4.20e-05 6j05-a1-m1-cB_6j05-a1-m1-cA
27 6j0e-a1-m1-cB 125 67 0.2474 0.1920 0.3582 6.24e-05 6j0e-a1-m1-cA_6j0e-a1-m1-cB
28 6j0e-a1-m1-cA 124 67 0.2474 0.1935 0.3582 6.42e-05 6j0e-a1-m1-cA_6j0e-a1-m1-cB
29 1r23-a1-m1-cB 97 73 0.2990 0.2990 0.3973 9.85e-05 1r23-a1-m1-cB_1r23-a1-m1-cA
30 1r23-a1-m1-cA 104 73 0.2990 0.2788 0.3973 1.24e-04 1r23-a1-m1-cB_1r23-a1-m1-cA
31 3gw2-a1-m2-cA 92 83 0.3299 0.3478 0.3855 4.33e-04 3gw2-a1-m1-cA_3gw2-a1-m2-cA
32 3gw2-a1-m1-cA 92 83 0.3299 0.3478 0.3855 4.33e-04 3gw2-a1-m1-cA_3gw2-a1-m2-cA
33 6o8l-a1-m2-cA 92 75 0.2680 0.2826 0.3467 8.60e-04 6o8l-a1-m1-cA_6o8l-a1-m2-cA
34 6o8l-a1-m1-cA 92 75 0.2680 0.2826 0.3467 8.60e-04 6o8l-a1-m1-cA_6o8l-a1-m2-cA
35 3pqk-a3-m1-cF 99 89 0.2268 0.2222 0.2472 0.001 3pqk-a3-m1-cF_3pqk-a3-m1-cE
36 3pqk-a3-m1-cE 100 89 0.2268 0.2200 0.2472 0.002 3pqk-a3-m1-cF_3pqk-a3-m1-cE
37 3jth-a1-m1-cB 88 40 0.1856 0.2045 0.4500 0.007 3jth-a1-m1-cB_3jth-a1-m1-cA
38 3jth-a1-m1-cA 92 40 0.1856 0.1957 0.4500 0.008 3jth-a1-m1-cB_3jth-a1-m1-cA
39 2p4w-a1-m1-cB 198 77 0.2474 0.1212 0.3117 0.013 2p4w-a1-m1-cA_2p4w-a1-m1-cB
40 2p4w-a1-m1-cA 197 77 0.2474 0.1218 0.3117 0.014 2p4w-a1-m1-cA_2p4w-a1-m1-cB
41 7txn-a1-m1-cA 104 59 0.2062 0.1923 0.3390 0.059 7txn-a1-m1-cA_7txn-a1-m1-cB
42 7txn-a1-m1-cB 105 59 0.2062 0.1905 0.3390 0.084 7txn-a1-m1-cA_7txn-a1-m1-cB
43 3f6o-a1-m1-cB 91 56 0.1753 0.1868 0.3036 0.089 3f6o-a1-m1-cB_3f6o-a1-m1-cA
44 3cuo-a2-m1-cD 94 72 0.2371 0.2447 0.3194 0.094 3cuo-a2-m1-cD_3cuo-a2-m1-cC
45 3f6o-a2-m2-cA 97 56 0.1753 0.1753 0.3036 0.096 3f6o-a2-m1-cA_3f6o-a2-m2-cA
46 3f6o-a2-m1-cA 97 56 0.1753 0.1753 0.3036 0.096 3f6o-a2-m1-cA_3f6o-a2-m2-cA
47 3f6o-a1-m1-cA 97 56 0.1753 0.1753 0.3036 0.096 3f6o-a1-m1-cB_3f6o-a1-m1-cA
48 3cuo-a2-m1-cC 95 72 0.2371 0.2421 0.3194 0.11 3cuo-a2-m1-cD_3cuo-a2-m1-cC
49 1ub9-a1-m2-cA 100 53 0.1959 0.1900 0.3585 0.46 1ub9-a1-m1-cA_1ub9-a1-m2-cA
50 1ub9-a1-m1-cA 100 53 0.1959 0.1900 0.3585 0.46 1ub9-a1-m1-cA_1ub9-a1-m2-cA
51 3f72-a2-m1-cD 100 58 0.2062 0.2000 0.3448 0.86 3f72-a2-m1-cD_3f72-a2-m1-cC
52 3hta-a1-m1-cB 179 19 0.1237 0.0670 0.6316 0.87 3hta-a1-m1-cB_3hta-a1-m1-cA
53 3f72-a2-m1-cC 103 59 0.2062 0.1942 0.3390 0.87 3f72-a2-m1-cD_3f72-a2-m1-cC
54 3hta-a1-m1-cA 190 19 0.1237 0.0632 0.6316 0.88 3hta-a1-m1-cB_3hta-a1-m1-cA
55 6uvu-a1-m1-cA 111 75 0.2680 0.2342 0.3467 0.90 6uvu-a1-m1-cA_6uvu-a1-m1-cB
56 6uvu-a1-m1-cB 114 75 0.2680 0.2281 0.3467 0.92 6uvu-a1-m1-cA_6uvu-a1-m1-cB
57 2eth-a2-m2-cB 135 27 0.1237 0.0889 0.4444 1.2 2eth-a2-m1-cA_2eth-a2-m2-cB, 2eth-a2-m2-cA_2eth-a2-m2-cB
58 2eth-a2-m2-cA 135 27 0.1237 0.0889 0.4444 1.2 2eth-a2-m1-cA_2eth-a2-m2-cA, 2eth-a2-m2-cA_2eth-a2-m2-cB
59 2eth-a2-m1-cA 135 27 0.1237 0.0889 0.4444 1.2 2eth-a2-m1-cA_2eth-a2-m2-cA, 2eth-a2-m1-cA_2eth-a2-m2-cB
60 6jmi-a1-m1-cD 83 53 0.1959 0.2289 0.3585 2.6 6jmi-a1-m1-cD_6jmi-a1-m1-cA
61 1f3o-a1-m2-cA 225 29 0.1134 0.0489 0.3793 2.7 1f3o-a1-m1-cA_1f3o-a1-m2-cA
62 1f3o-a1-m1-cA 225 29 0.1134 0.0489 0.3793 2.7 1f3o-a1-m1-cA_1f3o-a1-m2-cA
63 6vtv-a1-m1-cB 252 47 0.1753 0.0675 0.3617 3.1 6vtv-a1-m1-cA_6vtv-a1-m1-cB
64 6vtv-a1-m1-cA 249 47 0.1753 0.0683 0.3617 3.2 6vtv-a1-m1-cA_6vtv-a1-m1-cB
65 4e4j-a6-m1-cL 399 59 0.1753 0.0426 0.2881 4.6 4e4j-a6-m1-cK_4e4j-a6-m1-cL
66 4e4j-a6-m1-cK 399 59 0.1753 0.0426 0.2881 4.6 4e4j-a6-m1-cK_4e4j-a6-m1-cL

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Reference:
Jacob Schwartz et al.

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