Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=80)
ALDCRERIEKDLEDLEKELMEMKSIKLSDDEEAVVERALNYRDDSVYYLEKGDHITSFGC
ITYAEGLTDSLRMLHRIIEG

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 4fzp-a1-m1-cA 81 80 1.0000 0.9877 1.0000 6.08e-53 4fzp-a1-m1-cB_4fzp-a1-m1-cA
2 4fzp-a1-m1-cB 80 80 1.0000 1.0000 1.0000 6.96e-53 4fzp-a1-m1-cB_4fzp-a1-m1-cA
3 2oo2-a1-m2-cA 76 64 0.2500 0.2632 0.3125 0.003 2oo2-a1-m1-cA_2oo2-a1-m2-cA
4 2oo2-a1-m1-cA 76 64 0.2500 0.2632 0.3125 0.003 2oo2-a1-m1-cA_2oo2-a1-m2-cA
5 5e7s-a2-m1-cG 289 31 0.1750 0.0484 0.4516 4.4 5e7s-a2-m3-cI_5e7s-a2-m1-cG
6 4ypm-a1-m6-cA 290 31 0.1750 0.0483 0.4516 4.4 4ypm-a1-m2-cA_4ypm-a1-m6-cA
7 4ypm-a1-m2-cA 290 31 0.1750 0.0483 0.4516 4.4 4ypm-a1-m2-cA_4ypm-a1-m6-cA
8 5e7s-a2-m3-cI 287 31 0.1750 0.0488 0.4516 4.7 5e7s-a2-m3-cI_5e7s-a2-m1-cG
9 5e7s-a1-m1-cC 287 31 0.1750 0.0488 0.4516 4.7 5e7s-a1-m1-cC_5e7s-a1-m2-cE
10 5e7s-a1-m2-cE 288 31 0.1750 0.0486 0.4516 4.7 5e7s-a1-m1-cC_5e7s-a1-m2-cE
11 6e6b-a1-m1-cA 633 66 0.2250 0.0284 0.2727 5.9 6e6b-a1-m1-cB_6e6b-a1-m1-cA
12 6e6b-a1-m1-cB 625 66 0.2250 0.0288 0.2727 5.9 6e6b-a1-m1-cB_6e6b-a1-m1-cA
13 6wqh-a1-m1-cF 537 31 0.1750 0.0261 0.4516 6.9 6wqh-a1-m1-cA_6wqh-a1-m1-cF
14 6wqh-a1-m1-cD 537 31 0.1750 0.0261 0.4516 6.9 6wqh-a1-m1-cD_6wqh-a1-m1-cC
15 6wqh-a1-m1-cA 537 31 0.1750 0.0261 0.4516 6.9 6wqh-a1-m1-cA_6wqh-a1-m1-cF
16 4ypl-a1-m1-cE 537 31 0.1750 0.0261 0.4516 6.9 4ypl-a1-m1-cD_4ypl-a1-m1-cE
17 4ypl-a1-m1-cD 537 31 0.1750 0.0261 0.4516 6.9 4ypl-a1-m1-cD_4ypl-a1-m1-cE, 4ypl-a1-m1-cD_4ypl-a1-m1-cF
18 4ypl-a1-m1-cB 537 31 0.1750 0.0261 0.4516 6.9 4ypl-a1-m1-cA_4ypl-a1-m1-cB
19 4ypl-a1-m1-cA 537 31 0.1750 0.0261 0.4516 6.9 4ypl-a1-m1-cA_4ypl-a1-m1-cB
20 6wqh-a1-m1-cC 538 31 0.1750 0.0260 0.4516 6.9 6wqh-a1-m1-cD_6wqh-a1-m1-cC
21 4ypl-a1-m1-cF 538 31 0.1750 0.0260 0.4516 6.9 4ypl-a1-m1-cD_4ypl-a1-m1-cF
22 8fyb-a1-m1-cB 292 42 0.1750 0.0479 0.3333 8.4 8fyb-a1-m1-cB_8fyb-a1-m1-cC
23 4p1m-a1-m2-cB 107 77 0.2625 0.1963 0.2727 8.6 4p1m-a1-m1-cA_4p1m-a1-m2-cB, 4p1m-a1-m1-cB_4p1m-a1-m2-cB, 4p1m-a1-m2-cA_4p1m-a1-m2-cB
24 4p1m-a1-m1-cB 107 77 0.2625 0.1963 0.2727 8.6 4p1m-a1-m1-cB_4p1m-a1-m2-cB
25 3c70-a1-m2-cA 256 15 0.1125 0.0352 0.6000 8.7 3c70-a1-m1-cA_3c70-a1-m2-cA
26 3c70-a1-m1-cA 256 15 0.1125 0.0352 0.6000 8.7 3c70-a1-m1-cA_3c70-a1-m2-cA
27 2yas-a3-m3-cA 256 15 0.1125 0.0352 0.6000 8.7 2yas-a3-m1-cA_2yas-a3-m3-cA
28 2yas-a3-m1-cA 256 15 0.1125 0.0352 0.6000 8.7 2yas-a3-m1-cA_2yas-a3-m3-cA
29 8fyb-a1-m1-cC 309 40 0.1750 0.0453 0.3500 9.7 8fyb-a1-m1-cB_8fyb-a1-m1-cC
30 7fid-a1-m1-cF 779 31 0.1750 0.0180 0.4516 9.7 7fid-a1-m1-cC_7fid-a1-m1-cF
31 7fid-a1-m1-cD 779 31 0.1750 0.0180 0.4516 9.7 7fid-a1-m1-cA_7fid-a1-m1-cD
32 7fid-a1-m1-cC 779 31 0.1750 0.0180 0.4516 9.7 7fid-a1-m1-cC_7fid-a1-m1-cF
33 7fid-a1-m1-cA 779 31 0.1750 0.0180 0.4516 9.7 7fid-a1-m1-cA_7fid-a1-m1-cD
34 7fd4-a1-m1-cF 779 31 0.1750 0.0180 0.4516 9.7 7fd4-a1-m1-cD_7fd4-a1-m1-cF
35 7fd4-a1-m1-cE 779 31 0.1750 0.0180 0.4516 9.7 7fd4-a1-m1-cB_7fd4-a1-m1-cE
36 7fd4-a1-m1-cD 779 31 0.1750 0.0180 0.4516 9.7 7fd4-a1-m1-cD_7fd4-a1-m1-cF
37 7fd4-a1-m1-cB 779 31 0.1750 0.0180 0.4516 9.7 7fd4-a1-m1-cA_7fd4-a1-m1-cB, 7fd4-a1-m1-cB_7fd4-a1-m1-cE
38 7fd4-a1-m1-cA 779 31 0.1750 0.0180 0.4516 9.7 7fd4-a1-m1-cA_7fd4-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600