Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
ALKGSLEGMILERISRGETYGYEITKYLNDLGFDEIVEGTVYTILVRLEKKGLVEIEKKK
SELGPPRKFYTLSPAGEEELAIFWKRWDFIQGKIMQVK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6abt-a1-m1-cB 98 98 1.0000 1.0000 1.0000 2.55e-66 6abt-a1-m1-cA_6abt-a1-m1-cB
2 6abt-a1-m1-cA 98 98 1.0000 1.0000 1.0000 2.55e-66 6abt-a1-m1-cA_6abt-a1-m1-cB
3 4esf-a1-m2-cA 100 97 0.6939 0.6800 0.7010 2.38e-43 4esf-a1-m1-cA_4esf-a1-m2-cA
4 4esf-a1-m1-cA 100 97 0.6939 0.6800 0.7010 2.38e-43 4esf-a1-m1-cA_4esf-a1-m2-cA
5 3hhh-a1-m1-cB 101 97 0.6224 0.6040 0.6289 5.11e-34 3hhh-a1-m1-cA_3hhh-a1-m1-cB
6 3hhh-a1-m1-cA 100 97 0.6122 0.6000 0.6186 1.79e-33 3hhh-a1-m1-cA_3hhh-a1-m1-cB
7 5zqh-a1-m2-cA 101 97 0.4184 0.4059 0.4227 2.09e-22 5zqh-a1-m1-cA_5zqh-a1-m2-cA
8 5zqh-a1-m1-cA 101 97 0.4184 0.4059 0.4227 2.09e-22 5zqh-a1-m1-cA_5zqh-a1-m2-cA
9 4esb-a1-m2-cA 103 93 0.4082 0.3883 0.4301 2.49e-20 4esb-a1-m1-cA_4esb-a1-m2-cA
10 4esb-a1-m1-cA 103 93 0.4082 0.3883 0.4301 2.49e-20 4esb-a1-m1-cA_4esb-a1-m2-cA
11 3l7w-a1-m2-cA 104 83 0.2857 0.2692 0.3373 6.13e-09 3l7w-a1-m1-cA_3l7w-a1-m2-cA
12 3l7w-a1-m1-cA 104 83 0.2857 0.2692 0.3373 6.13e-09 3l7w-a1-m1-cA_3l7w-a1-m2-cA
13 5h20-a1-m2-cA 103 86 0.3265 0.3107 0.3721 1.37e-08 5h20-a1-m1-cA_5h20-a1-m2-cA
14 5h20-a1-m1-cA 103 86 0.3265 0.3107 0.3721 1.37e-08 5h20-a1-m1-cA_5h20-a1-m2-cA
15 5dym-a1-m2-cA 96 94 0.3061 0.3125 0.3191 3.19e-07 5dym-a1-m1-cA_5dym-a1-m2-cA
16 5dym-a1-m1-cA 96 94 0.3061 0.3125 0.3191 3.19e-07 5dym-a1-m1-cA_5dym-a1-m2-cA
17 7wjp-a1-m2-cA 98 86 0.2857 0.2857 0.3256 9.57e-06 7wjp-a1-m1-cA_7wjp-a1-m2-cA
18 7wjp-a1-m1-cA 98 86 0.2857 0.2857 0.3256 9.57e-06 7wjp-a1-m1-cA_7wjp-a1-m2-cA
19 1xma-a1-m2-cB 103 81 0.2857 0.2718 0.3457 2.52e-05 1xma-a1-m1-cA_1xma-a1-m2-cB
20 1xma-a1-m1-cA 101 79 0.2755 0.2673 0.3418 2.54e-05 1xma-a1-m1-cA_1xma-a1-m2-cB
21 6r1l-a1-m2-cA 100 92 0.2857 0.2800 0.3043 2.96e-05 6r1l-a1-m1-cA_6r1l-a1-m2-cA
22 6r1l-a1-m1-cA 100 92 0.2857 0.2800 0.3043 2.96e-05 6r1l-a1-m1-cA_6r1l-a1-m2-cA
23 5zi8-a1-m1-cB 103 78 0.2449 0.2330 0.3077 5.94e-05 5zi8-a1-m1-cB_5zi8-a1-m1-cA
24 5zi8-a1-m1-cA 104 78 0.2449 0.2308 0.3077 6.04e-05 5zi8-a1-m1-cB_5zi8-a1-m1-cA
25 2esh-a2-m2-cA 114 75 0.2449 0.2105 0.3200 2.59e-04 2esh-a2-m1-cA_2esh-a2-m2-cA
26 2esh-a2-m1-cA 114 75 0.2449 0.2105 0.3200 2.59e-04 2esh-a2-m1-cA_2esh-a2-m2-cA
27 3l9f-a2-m1-cC 170 79 0.2653 0.1529 0.3291 0.006 3l9f-a2-m1-cB_3l9f-a2-m1-cC
28 3l9f-a2-m1-cB 170 79 0.2653 0.1529 0.3291 0.006 3l9f-a2-m1-cB_3l9f-a2-m1-cC
29 2zfw-a1-m1-cB 112 83 0.2551 0.2232 0.3012 0.046 2zfw-a1-m1-cA_2zfw-a1-m1-cB
30 2zfw-a1-m1-cA 112 83 0.2551 0.2232 0.3012 0.046 2zfw-a1-m1-cA_2zfw-a1-m1-cB
31 5x13-a1-m2-cA 177 77 0.2551 0.1412 0.3247 0.10 5x13-a1-m1-cA_5x13-a1-m2-cA
32 5x13-a1-m1-cA 177 77 0.2551 0.1412 0.3247 0.10 5x13-a1-m1-cA_5x13-a1-m2-cA
33 1z7u-a1-m1-cA 107 61 0.2449 0.2243 0.3934 0.48 1z7u-a1-m1-cB_1z7u-a1-m1-cA
34 1z7u-a1-m1-cB 106 61 0.2449 0.2264 0.3934 0.49 1z7u-a1-m1-cB_1z7u-a1-m1-cA
35 2dql-a1-m1-cB 115 87 0.2347 0.2000 0.2644 0.57 2dql-a1-m1-cA_2dql-a1-m1-cB
36 2dql-a1-m1-cA 115 87 0.2347 0.2000 0.2644 0.57 2dql-a1-m1-cA_2dql-a1-m1-cB
37 2nnn-a4-m1-cG 131 52 0.1735 0.1298 0.3269 0.85 2nnn-a4-m1-cG_2nnn-a4-m1-cH
38 6bhf-a1-m2-cA 249 78 0.2245 0.0884 0.2821 2.2 6bhf-a1-m1-cA_6bhf-a1-m2-cA
39 6bhf-a1-m1-cA 249 78 0.2245 0.0884 0.2821 2.2 6bhf-a1-m1-cA_6bhf-a1-m2-cA
40 2fsw-a1-m1-cA 99 33 0.1633 0.1616 0.4848 4.1 2fsw-a1-m1-cA_2fsw-a1-m1-cB
41 2fsw-a1-m1-cB 100 33 0.1633 0.1600 0.4848 4.3 2fsw-a1-m1-cA_2fsw-a1-m1-cB
42 6a6a-a1-m1-cA 183 36 0.1531 0.0820 0.4167 9.7 6a6a-a1-m1-cB_6a6a-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600