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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=41)
ALKKHHENEISHHAKEIERLQKEIERHKQSIKKLKQSEDDD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1hf9-a1-m1-cB 41 41 1.0000 1.0000 1.0000 1.88e-21 1hf9-a1-m1-cA_1hf9-a1-m1-cB
2 1hf9-a1-m1-cA 41 41 1.0000 1.0000 1.0000 1.88e-21 1hf9-a1-m1-cA_1hf9-a1-m1-cB
3 1gmj-a1-m1-cA 65 40 0.9512 0.6000 0.9750 7.25e-20 1gmj-a1-m1-cB_1gmj-a1-m1-cA
4 6j5k-a1-m1-cJ 78 35 0.8293 0.4359 0.9714 1.00e-16 6j5k-a1-m1-cCJ_6j5k-a1-m1-cJ
5 1gmj-a1-m1-cB 60 36 0.8537 0.5833 0.9722 1.07e-16 1gmj-a1-m1-cB_1gmj-a1-m1-cA
6 1gmj-a2-m1-cC 59 35 0.8293 0.5763 0.9714 5.87e-16 1gmj-a2-m1-cD_1gmj-a2-m1-cC
7 1gmj-a2-m1-cD 56 35 0.8293 0.6071 0.9714 7.27e-16 1gmj-a2-m1-cD_1gmj-a2-m1-cC
8 6j5k-a1-m1-cCJ 75 32 0.7561 0.4133 0.9688 6.53e-15 6j5k-a1-m1-cCJ_6j5k-a1-m1-cJ
9 6mgw-a1-m1-cB 634 24 0.1707 0.0110 0.2917 3.3 6mgw-a1-m1-cA_6mgw-a1-m1-cB
10 6mgw-a1-m1-cA 634 24 0.1707 0.0110 0.2917 3.3 6mgw-a1-m1-cA_6mgw-a1-m1-cB
11 6ijz-a1-m1-cB 683 24 0.1707 0.0102 0.2917 3.3 6ijz-a1-m1-cA_6ijz-a1-m1-cB
12 6ijz-a1-m1-cA 683 24 0.1707 0.0102 0.2917 3.3 6ijz-a1-m1-cA_6ijz-a1-m1-cB
13 1z68-a1-m1-cB 719 36 0.3171 0.0181 0.3611 3.4 1z68-a1-m1-cA_1z68-a1-m1-cB
14 1z68-a1-m1-cA 719 36 0.3171 0.0181 0.3611 3.4 1z68-a1-m1-cA_1z68-a1-m1-cB
15 2yo3-a1-m1-cB 258 30 0.2927 0.0465 0.4000 4.0 2yo3-a1-m1-cC_2yo3-a1-m1-cB
16 2yo3-a1-m1-cC 257 30 0.2927 0.0467 0.4000 4.1 2yo3-a1-m1-cC_2yo3-a1-m1-cB
17 2oqg-a1-m1-cB 107 30 0.2439 0.0935 0.3333 4.5 2oqg-a1-m1-cA_2oqg-a1-m1-cB, 2oqg-a1-m1-cD_2oqg-a1-m1-cB
18 3zcc-a1-m1-cB 110 30 0.3415 0.1273 0.4667 4.9 3zcc-a1-m1-cA_3zcc-a1-m1-cB
19 3zcc-a1-m1-cA 110 30 0.3415 0.1273 0.4667 4.9 3zcc-a1-m1-cA_3zcc-a1-m1-cB
20 5vnk-a1-m1-cB 729 23 0.1951 0.0110 0.3478 5.4 5vnk-a1-m1-cD_5vnk-a1-m1-cB
21 2lfs-a1-m1-cB 111 30 0.3415 0.1261 0.4667 5.4 2lfs-a1-m1-cA_2lfs-a1-m1-cB
22 2lfs-a1-m1-cA 111 30 0.3415 0.1261 0.4667 5.4 2lfs-a1-m1-cA_2lfs-a1-m1-cB
23 2lfr-a1-m1-cB 111 30 0.3415 0.1261 0.4667 5.7 2lfr-a1-m1-cA_2lfr-a1-m1-cB
24 2lfr-a1-m1-cA 111 30 0.3415 0.1261 0.4667 5.7 2lfr-a1-m1-cA_2lfr-a1-m1-cB
25 3zrw-a1-m1-cA 111 30 0.3415 0.1261 0.4667 5.9 3zrw-a1-m1-cB_3zrw-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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