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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
ALRLVDPQIQLAVTVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTKLA
TTEELPDEFVVVTVK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7ye8-a2-m1-cC 75 75 1.0000 1.0000 1.0000 7.04e-49 7ye8-a2-m1-cC_7ye8-a2-m1-cD
2 7ye8-a2-m1-cD 78 76 0.9867 0.9487 0.9737 4.53e-46 7ye8-a2-m1-cC_7ye8-a2-m1-cD
3 2cme-a2-m1-cD 76 75 0.8000 0.7895 0.8000 1.84e-35 2cme-a2-m1-cC_2cme-a2-m1-cD
4 2cme-a2-m1-cC 76 75 0.8000 0.7895 0.8000 1.84e-35 2cme-a2-m1-cC_2cme-a2-m1-cD
5 6sek-a1-m1-cB 504 45 0.2133 0.0317 0.3556 0.095 6sek-a1-m1-cA_6sek-a1-m1-cB
6 6sek-a1-m1-cA 504 45 0.2133 0.0317 0.3556 0.095 6sek-a1-m1-cA_6sek-a1-m1-cB
7 6se3-a3-m1-cF 528 49 0.2267 0.0322 0.3469 2.0 6se3-a3-m1-cC_6se3-a3-m1-cF
8 6se3-a3-m1-cC 528 49 0.2267 0.0322 0.3469 2.0 6se3-a3-m1-cC_6se3-a3-m1-cF
9 1a6d-a1-m8-cA 503 28 0.1200 0.0179 0.3214 8.8 1a6d-a1-m3-cA_1a6d-a1-m8-cA
10 1a6d-a1-m3-cA 503 28 0.1200 0.0179 0.3214 8.8 1a6d-a1-m3-cA_1a6d-a1-m8-cA
11 3fh0-a1-m1-cB 122 71 0.2533 0.1557 0.2676 9.2 3fh0-a1-m1-cA_3fh0-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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