Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
ALTFDALAETSEFARKWVPFVKKYNIEPRAPEWYFSQKIDYLKDKVHPSFVKDRRAKREY
EEFKVRINGLVAKAQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5jnp-a3-m1-cB 75 75 1.0000 1.0000 1.0000 1.07e-50 5jnp-a3-m1-cA_5jnp-a3-m1-cB
2 5jnp-a3-m1-cA 75 75 1.0000 1.0000 1.0000 1.07e-50 5jnp-a3-m1-cA_5jnp-a3-m1-cB
3 6wlb-a1-m1-cC 720 75 0.8000 0.0833 0.8000 9.91e-37 6wlb-a1-m1-cB_6wlb-a1-m1-cC
4 6wlb-a1-m1-cB 720 75 0.8000 0.0833 0.8000 9.91e-37 6wlb-a1-m1-cB_6wlb-a1-m1-cC
5 7d5k-a1-m1-cC 727 75 0.7867 0.0812 0.7867 3.22e-35 7d5k-a1-m1-cB_7d5k-a1-m1-cC
6 7d5k-a1-m1-cB 727 75 0.7867 0.0812 0.7867 3.22e-35 7d5k-a1-m1-cB_7d5k-a1-m1-cC
7 2ykq-a1-m1-cC 196 67 0.3200 0.1224 0.3582 0.77 2ykq-a1-m1-cB_2ykq-a1-m1-cC
8 2ykq-a1-m1-cB 194 67 0.3200 0.1237 0.3582 0.86 2ykq-a1-m1-cB_2ykq-a1-m1-cC
9 6wk2-a1-m1-cD 483 65 0.2133 0.0331 0.2462 1.8 6wk2-a1-m1-cA_6wk2-a1-m1-cD
10 6wk2-a1-m1-cA 483 65 0.2133 0.0331 0.2462 1.8 6wk2-a1-m1-cA_6wk2-a1-m1-cD
11 3smt-a2-m2-cA 455 65 0.2133 0.0352 0.2462 2.0 3smt-a2-m1-cA_3smt-a2-m2-cA
12 3smt-a2-m1-cA 455 65 0.2133 0.0352 0.2462 2.0 3smt-a2-m1-cA_3smt-a2-m2-cA
13 6y9a-a1-m1-cB 169 24 0.1200 0.0533 0.3750 2.9 6y9a-a1-m1-cA_6y9a-a1-m1-cB
14 6y9a-a1-m1-cA 169 24 0.1200 0.0533 0.3750 2.9 6y9a-a1-m1-cA_6y9a-a1-m1-cB
15 2qnf-a1-m1-cB 157 17 0.1067 0.0510 0.4706 3.0 2qnf-a1-m1-cA_2qnf-a1-m1-cB
16 2qnf-a1-m1-cA 157 17 0.1067 0.0510 0.4706 3.0 2qnf-a1-m1-cA_2qnf-a1-m1-cB
17 2ykp-a1-m1-cB 200 31 0.1733 0.0650 0.4194 7.6 2ykp-a1-m1-cB_2ykp-a1-m1-cA
18 2ykp-a1-m1-cA 203 31 0.1733 0.0640 0.4194 8.0 2ykp-a1-m1-cB_2ykp-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600