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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
ALTQGLERIPDQLGYLVLSEGAVLASSGDLENDEQAASAISELVSTACGFRKRLSVVFGE
HTLLVTVSGQRVFVVKRQNR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5vok-a6-m3-cH 80 80 1.0000 1.0000 1.0000 3.30e-53 5vok-a6-m3-cH_5vok-a6-m1-cF
2 5vok-a6-m1-cF 93 89 1.0000 0.8602 0.8989 3.86e-50 5vok-a6-m3-cH_5vok-a6-m1-cF
3 2o3i-a2-m2-cA 366 35 0.1625 0.0355 0.3714 1.2 2o3i-a2-m2-cB_2o3i-a2-m2-cA
4 2o3i-a2-m1-cA 366 35 0.1625 0.0355 0.3714 1.2 2o3i-a2-m2-cB_2o3i-a2-m1-cA
5 2o3i-a2-m2-cB 365 35 0.1625 0.0356 0.3714 1.3 2o3i-a2-m2-cB_2o3i-a2-m1-cA, 2o3i-a2-m2-cB_2o3i-a2-m2-cA
6 3qhq-a1-m2-cA 222 67 0.2625 0.0946 0.3134 1.4 3qhq-a1-m2-cB_3qhq-a1-m2-cA
7 3qhq-a1-m1-cA 222 67 0.2625 0.0946 0.3134 1.4 3qhq-a1-m2-cB_3qhq-a1-m1-cA
8 3qhq-a1-m2-cB 211 67 0.2625 0.0995 0.3134 1.4 3qhq-a1-m2-cB_3qhq-a1-m1-cA, 3qhq-a1-m2-cB_3qhq-a1-m2-cA
9 1op8-a3-m1-cF 234 36 0.1125 0.0385 0.2500 8.1 1op8-a3-m1-cF_1op8-a3-m1-cE
10 1op8-a3-m1-cE 234 36 0.1125 0.0385 0.2500 8.1 1op8-a3-m1-cF_1op8-a3-m1-cE

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Reference:
Jacob Schwartz et al.

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