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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
AMALIEVEKPLYGVEVFVGETAHFEIELSEPDVHGQWKLKGQPLAASPDCEIIEDGKKHI
LILHNCQLGMTGEVSFQAANTKSAANLKVKEL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1waa-a1-m1-cA 92 92 1.0000 1.0000 1.0000 3.34e-64 1waa-a1-m1-cA_1waa-a1-m1-cD
2 1waa-a1-m1-cD 93 92 1.0000 0.9892 1.0000 3.89e-64 1waa-a1-m1-cA_1waa-a1-m1-cD, 1waa-a1-m1-cC_1waa-a1-m1-cD
3 1waa-a1-m1-cC 93 92 1.0000 0.9892 1.0000 3.89e-64 1waa-a1-m1-cC_1waa-a1-m1-cD, 1waa-a1-m1-cC_1waa-a1-m1-cF
4 1waa-a1-m1-cF 93 92 0.9891 0.9785 0.9891 3.24e-63 1waa-a1-m1-cC_1waa-a1-m1-cF
5 5jdj-a1-m1-cA 91 89 0.3043 0.3077 0.3146 1.36e-07 5jdj-a1-m1-cL_5jdj-a1-m1-cA
6 5jdj-a1-m1-cL 90 89 0.3043 0.3111 0.3146 1.37e-07 5jdj-a1-m1-cL_5jdj-a1-m1-cA
7 2yxm-a1-m2-cA 92 88 0.2609 0.2609 0.2727 1.13e-05 2yxm-a1-m1-cA_2yxm-a1-m2-cA
8 2yxm-a1-m1-cA 92 88 0.2609 0.2609 0.2727 1.13e-05 2yxm-a1-m1-cA_2yxm-a1-m2-cA
9 6hci-a1-m1-cD 97 80 0.2826 0.2680 0.3250 0.003 6hci-a1-m1-cA_6hci-a1-m1-cD, 6hci-a1-m1-cC_6hci-a1-m1-cD
10 6hci-a1-m1-cA 97 80 0.2826 0.2680 0.3250 0.003 6hci-a1-m1-cA_6hci-a1-m1-cD
11 6hci-a1-m1-cC 96 72 0.2391 0.2292 0.3056 0.008 6hci-a1-m1-cC_6hci-a1-m1-cD
12 6stw-a1-m1-cB 190 30 0.1630 0.0789 0.5000 0.97 6stw-a1-m1-cA_6stw-a1-m1-cB
13 6stw-a1-m1-cA 190 30 0.1630 0.0789 0.5000 0.97 6stw-a1-m1-cA_6stw-a1-m1-cB
14 1q7s-a3-m1-cA 117 66 0.2065 0.1624 0.2879 2.0 1q7s-a3-m1-cB_1q7s-a3-m1-cA
15 5koi-a3-m1-cH 271 41 0.1196 0.0406 0.2683 4.2 5koi-a3-m1-cE_5koi-a3-m1-cH
16 5koi-a3-m1-cE 271 41 0.1196 0.0406 0.2683 4.2 5koi-a3-m1-cE_5koi-a3-m1-cH
17 1i1c-a1-m1-cB 205 13 0.0761 0.0341 0.5385 6.2 1i1c-a1-m1-cA_1i1c-a1-m1-cB
18 1i1c-a1-m1-cA 205 13 0.0761 0.0341 0.5385 6.2 1i1c-a1-m1-cA_1i1c-a1-m1-cB
19 1q7s-a3-m1-cB 114 53 0.1739 0.1404 0.3019 6.5 1q7s-a3-m1-cB_1q7s-a3-m1-cA
20 5ump-a1-m1-cB 121 21 0.0978 0.0744 0.4286 8.1 5ump-a1-m1-cA_5ump-a1-m1-cB
21 5ump-a1-m1-cA 121 21 0.0978 0.0744 0.4286 8.1 5ump-a1-m1-cA_5ump-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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