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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
AMARGVNKVILIGNLGDDPELRYTGSGTAVCNMSLATNETNTEWHDVVAWGRLGEICNEY
LDKGSQVYFEGKLQTRSWEDRDNNTRYSTEVKAQEMMFL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5odn-a1-m1-cH 99 99 1.0000 1.0000 1.0000 1.12e-71 5odn-a1-m1-cA_5odn-a1-m1-cH
2 5odn-a1-m1-cA 99 99 1.0000 1.0000 1.0000 1.12e-71 5odn-a1-m1-cA_5odn-a1-m1-cD, 5odn-a1-m1-cA_5odn-a1-m1-cH
3 5odn-a1-m1-cD 106 100 1.0000 0.9340 0.9900 9.38e-70 5odn-a1-m1-cA_5odn-a1-m1-cD
4 5odn-a1-m1-cC 102 101 1.0000 0.9706 0.9802 1.05e-69 5odn-a1-m1-cC_5odn-a1-m1-cF
5 5odn-a1-m1-cF 105 104 0.9899 0.9333 0.9423 2.67e-68 5odn-a1-m1-cC_5odn-a1-m1-cF
6 5odn-a1-m1-cE 105 108 0.9495 0.8952 0.8704 3.86e-62 5odn-a1-m1-cG_5odn-a1-m1-cE
7 5odn-a1-m1-cG 102 108 0.9293 0.9020 0.8519 2.68e-60 5odn-a1-m1-cG_5odn-a1-m1-cE
8 5odp-a1-m1-cA 99 106 0.8485 0.8485 0.7925 1.15e-52 5odp-a1-m1-cA_5odp-a1-m1-cG
9 5odp-a1-m1-cG 100 107 0.8384 0.8300 0.7757 1.42e-51 5odp-a1-m1-cA_5odp-a1-m1-cG
10 3tqy-a1-m1-cD 96 95 0.5556 0.5729 0.5789 1.77e-35 3tqy-a1-m1-cD_3tqy-a1-m1-cC
11 1sru-a1-m1-cA 100 91 0.5657 0.5600 0.6154 4.15e-35 1sru-a1-m1-cA_1sru-a1-m1-cD, 1sru-a1-m1-cC_1sru-a1-m1-cA
12 1sru-a1-m1-cD 101 91 0.5556 0.5446 0.6044 1.59e-34 1sru-a1-m1-cA_1sru-a1-m1-cD
13 4mz9-a1-m1-cD 114 100 0.5556 0.4825 0.5500 1.95e-34 4mz9-a1-m1-cB_4mz9-a1-m1-cD, 4mz9-a1-m1-cC_4mz9-a1-m1-cD
14 4mz9-a1-m1-cC 114 100 0.5556 0.4825 0.5500 1.95e-34 4mz9-a1-m1-cB_4mz9-a1-m1-cC, 4mz9-a1-m1-cC_4mz9-a1-m1-cD
15 4mz9-a1-m1-cB 114 100 0.5556 0.4825 0.5500 1.95e-34 4mz9-a1-m1-cB_4mz9-a1-m1-cC, 4mz9-a1-m1-cB_4mz9-a1-m1-cD
16 7f25-a1-m1-cB 106 100 0.5455 0.5094 0.5400 4.52e-34 7f25-a1-m1-cA_7f25-a1-m1-cB
17 7f25-a1-m1-cA 106 100 0.5455 0.5094 0.5400 4.52e-34 7f25-a1-m1-cA_7f25-a1-m1-cB
18 1kaw-a1-m1-cD 96 89 0.5455 0.5625 0.6067 7.60e-34 1kaw-a1-m1-cC_1kaw-a1-m1-cD
19 1kaw-a1-m1-cC 96 89 0.5455 0.5625 0.6067 7.60e-34 1kaw-a1-m1-cA_1kaw-a1-m1-cC, 1kaw-a1-m1-cC_1kaw-a1-m1-cD
20 1kaw-a1-m1-cA 96 89 0.5455 0.5625 0.6067 7.60e-34 1kaw-a1-m1-cA_1kaw-a1-m1-cC
21 3tqy-a1-m1-cC 106 105 0.5556 0.5189 0.5238 1.72e-33 3tqy-a1-m1-cD_3tqy-a1-m1-cC
22 1sru-a1-m1-cC 96 91 0.5455 0.5625 0.5934 3.79e-32 1sru-a1-m1-cC_1sru-a1-m1-cA
23 3pgz-a1-m1-cA 109 100 0.4848 0.4404 0.4800 4.99e-28 3pgz-a1-m1-cA_3pgz-a1-m1-cB
24 3pgz-a1-m1-cB 114 105 0.4848 0.4211 0.4571 3.84e-27 3pgz-a1-m1-cA_3pgz-a1-m1-cB
25 3lgj-a1-m1-cB 97 87 0.4545 0.4639 0.5172 1.30e-24 3lgj-a1-m1-cA_3lgj-a1-m1-cB
26 3lgj-a1-m1-cA 95 87 0.4444 0.4632 0.5057 1.26e-21 3lgj-a1-m1-cA_3lgj-a1-m1-cB
27 6bhx-a1-m1-cC 102 96 0.4040 0.3922 0.4167 1.50e-20 6bhx-a1-m1-cA_6bhx-a1-m1-cC
28 6bhw-a2-m1-cG 101 99 0.4040 0.3960 0.4040 2.15e-20 6bhw-a2-m1-cE_6bhw-a2-m1-cG
29 6bhw-a2-m1-cE 99 97 0.3939 0.3939 0.4021 2.56e-20 6bhw-a2-m1-cE_6bhw-a2-m1-cG, 6bhw-a2-m1-cF_6bhw-a2-m1-cE
30 6bhw-a2-m1-cF 96 94 0.3838 0.3958 0.4043 5.30e-20 6bhw-a2-m1-cF_6bhw-a2-m1-cE
31 6bhx-a1-m1-cA 98 96 0.4141 0.4184 0.4271 4.24e-19 6bhx-a1-m1-cA_6bhx-a1-m1-cC
32 7d8j-a1-m2-cA 112 102 0.3939 0.3482 0.3824 1.37e-17 7d8j-a1-m1-cA_7d8j-a1-m2-cA, 7d8j-a1-m2-cB_7d8j-a1-m2-cA
33 7d8j-a1-m1-cA 112 102 0.3939 0.3482 0.3824 1.37e-17 7d8j-a1-m1-cA_7d8j-a1-m2-cA, 7d8j-a1-m2-cB_7d8j-a1-m1-cA
34 2fxq-a1-m2-cA 197 90 0.4040 0.2030 0.4444 1.51e-17 2fxq-a1-m1-cA_2fxq-a1-m2-cA
35 2fxq-a1-m2-cA 197 84 0.3232 0.1624 0.3810 5.08e-12 2fxq-a1-m1-cA_2fxq-a1-m2-cA
36 2fxq-a1-m1-cA 197 90 0.4040 0.2030 0.4444 1.51e-17 2fxq-a1-m1-cA_2fxq-a1-m2-cA
37 2fxq-a1-m1-cA 197 84 0.3232 0.1624 0.3810 5.08e-12 2fxq-a1-m1-cA_2fxq-a1-m2-cA
38 2ihf-a1-m2-cA 205 103 0.3838 0.1854 0.3689 2.85e-16 2ihf-a1-m1-cA_2ihf-a1-m2-cA
39 2ihf-a1-m2-cA 205 90 0.3939 0.1902 0.4333 2.04e-14 2ihf-a1-m1-cA_2ihf-a1-m2-cA
40 2ihf-a1-m1-cA 205 103 0.3838 0.1854 0.3689 2.85e-16 2ihf-a1-m1-cA_2ihf-a1-m2-cA
41 2ihf-a1-m1-cA 205 90 0.3939 0.1902 0.4333 2.04e-14 2ihf-a1-m1-cA_2ihf-a1-m2-cA
42 5xgt-a1-m1-cA 104 102 0.3636 0.3462 0.3529 6.86e-16 5xgt-a1-m1-cA_5xgt-a1-m1-cB
43 5xgt-a1-m1-cB 105 102 0.3636 0.3429 0.3529 6.88e-16 5xgt-a1-m1-cA_5xgt-a1-m1-cB
44 3ulp-a1-m1-cC 116 100 0.3232 0.2759 0.3200 3.56e-15 3ulp-a1-m1-cD_3ulp-a1-m1-cC
45 3a5u-a1-m2-cB 112 94 0.3636 0.3214 0.3830 8.22e-15 3a5u-a1-m2-cB_3a5u-a1-m2-cA
46 3ulp-a1-m1-cB 114 90 0.3131 0.2719 0.3444 1.61e-14 3ulp-a1-m1-cD_3ulp-a1-m1-cB
47 2vw9-a1-m2-cB 105 103 0.3636 0.3429 0.3495 2.36e-14 2vw9-a1-m1-cB_2vw9-a1-m2-cB
48 2vw9-a1-m1-cB 105 103 0.3636 0.3429 0.3495 2.36e-14 2vw9-a1-m1-cB_2vw9-a1-m2-cB
49 3ulp-a1-m1-cD 113 86 0.3030 0.2655 0.3488 2.54e-14 3ulp-a1-m1-cD_3ulp-a1-m1-cA, 3ulp-a1-m1-cD_3ulp-a1-m1-cB, 3ulp-a1-m1-cD_3ulp-a1-m1-cC
50 2dud-a2-m2-cB 92 97 0.3535 0.3804 0.3608 2.60e-14 2dud-a2-m2-cB_2dud-a2-m1-cA, 2dud-a2-m2-cB_2dud-a2-m2-cA
51 3vdy-a1-m1-cA 101 101 0.3737 0.3663 0.3663 3.82e-14 3vdy-a1-m2-cB_3vdy-a1-m1-cA
52 3ulp-a1-m1-cA 114 88 0.3030 0.2632 0.3409 4.66e-14 3ulp-a1-m1-cD_3ulp-a1-m1-cA
53 1z9f-a2-m4-cA 89 93 0.3737 0.4157 0.3978 5.46e-14 1z9f-a2-m1-cA_1z9f-a2-m4-cA, 1z9f-a2-m3-cA_1z9f-a2-m4-cA
54 1z9f-a2-m3-cA 89 93 0.3737 0.4157 0.3978 5.46e-14 1z9f-a2-m3-cA_1z9f-a2-m4-cA
55 1z9f-a2-m1-cA 89 93 0.3737 0.4157 0.3978 5.46e-14 1z9f-a2-m1-cA_1z9f-a2-m4-cA
56 1x3e-a1-m2-cB 119 104 0.3737 0.3109 0.3558 5.58e-14 1x3e-a1-m2-cA_1x3e-a1-m2-cB
57 1x3e-a1-m2-cA 110 94 0.3636 0.3273 0.3830 8.76e-14 1x3e-a1-m1-cA_1x3e-a1-m2-cA, 1x3e-a1-m2-cA_1x3e-a1-m2-cB
58 1x3e-a1-m1-cA 110 94 0.3636 0.3273 0.3830 8.76e-14 1x3e-a1-m1-cA_1x3e-a1-m2-cA
59 7f5z-a1-m2-cA 117 102 0.3636 0.3077 0.3529 9.65e-14 7f5z-a1-m2-cA_7f5z-a1-m2-cB
60 7d8j-a1-m2-cB 98 102 0.3737 0.3776 0.3627 1.12e-13 7d8j-a1-m2-cB_7d8j-a1-m1-cA, 7d8j-a1-m2-cB_7d8j-a1-m2-cA
61 7f5z-a1-m2-cB 118 102 0.3636 0.3051 0.3529 1.14e-13 7f5z-a1-m1-cB_7f5z-a1-m2-cB, 7f5z-a1-m2-cA_7f5z-a1-m2-cB
62 7f5z-a1-m1-cB 118 102 0.3636 0.3051 0.3529 1.14e-13 7f5z-a1-m1-cB_7f5z-a1-m2-cB
63 2dud-a2-m2-cA 95 100 0.3535 0.3684 0.3500 1.24e-13 2dud-a2-m2-cB_2dud-a2-m2-cA
64 2dud-a2-m1-cA 95 100 0.3535 0.3684 0.3500 1.24e-13 2dud-a2-m2-cB_2dud-a2-m1-cA
65 7f5y-a1-m2-cB 120 104 0.3636 0.3000 0.3462 1.56e-13 7f5y-a1-m2-cA_7f5y-a1-m2-cB
66 3udg-a2-m1-cC 214 100 0.4242 0.1963 0.4200 2.20e-13 3udg-a2-m1-cB_3udg-a2-m1-cC
67 3udg-a2-m1-cC 214 84 0.3030 0.1402 0.3571 1.83e-08 3udg-a2-m1-cB_3udg-a2-m1-cC
68 3eiv-a2-m1-cB 111 95 0.3535 0.3153 0.3684 2.98e-13 3eiv-a2-m1-cA_3eiv-a2-m1-cB
69 3udg-a2-m1-cB 214 97 0.4141 0.1916 0.4227 1.22e-12 3udg-a2-m1-cB_3udg-a2-m1-cC
70 3udg-a2-m1-cB 214 103 0.3636 0.1682 0.3495 1.27e-08 3udg-a2-m1-cB_3udg-a2-m1-cC
71 3vdy-a1-m2-cB 97 101 0.3535 0.3608 0.3465 2.04e-12 3vdy-a1-m1-cB_3vdy-a1-m2-cB, 3vdy-a1-m2-cB_3vdy-a1-m1-cA
72 3vdy-a1-m1-cB 97 101 0.3535 0.3608 0.3465 2.04e-12 3vdy-a1-m1-cB_3vdy-a1-m2-cB
73 1ue1-a1-m2-cB 119 104 0.3636 0.3025 0.3462 1.48e-11 1ue1-a1-m1-cB_1ue1-a1-m2-cB
74 1ue1-a1-m1-cB 119 104 0.3636 0.3025 0.3462 1.48e-11 1ue1-a1-m1-cB_1ue1-a1-m2-cB
75 3a5u-a1-m2-cA 118 104 0.3636 0.3051 0.3462 1.72e-11 3a5u-a1-m1-cA_3a5u-a1-m2-cA, 3a5u-a1-m2-cB_3a5u-a1-m2-cA
76 3a5u-a1-m1-cA 118 104 0.3636 0.3051 0.3462 1.72e-11 3a5u-a1-m1-cA_3a5u-a1-m2-cA
77 1ue7-a2-m3-cD 95 73 0.2626 0.2737 0.3562 1.66e-10 1ue7-a2-m1-cD_1ue7-a2-m3-cD
78 1ue7-a2-m1-cD 95 73 0.2626 0.2737 0.3562 1.66e-10 1ue7-a2-m1-cD_1ue7-a2-m3-cD
79 3eiv-a3-m1-cD 100 75 0.2727 0.2700 0.3600 5.28e-10 3eiv-a3-m1-cD_3eiv-a3-m1-cC
80 3eiv-a1-m1-cD 100 75 0.2727 0.2700 0.3600 5.28e-10 3eiv-a1-m1-cA_3eiv-a1-m1-cD
81 1ue7-a1-m2-cB 98 73 0.2727 0.2755 0.3699 5.33e-10 1ue7-a1-m2-cB_1ue7-a1-m1-cA, 1ue7-a1-m2-cB_1ue7-a1-m2-cA
82 3eiv-a3-m1-cC 111 86 0.3131 0.2793 0.3605 8.82e-10 3eiv-a3-m1-cD_3eiv-a3-m1-cC
83 3eiv-a2-m1-cA 98 70 0.2626 0.2653 0.3714 1.06e-09 3eiv-a2-m1-cA_3eiv-a2-m1-cB
84 3eiv-a1-m1-cA 98 70 0.2626 0.2653 0.3714 1.06e-09 3eiv-a1-m1-cA_3eiv-a1-m1-cD
85 7f5y-a1-m2-cA 109 99 0.3434 0.3119 0.3434 1.46e-09 7f5y-a1-m2-cA_7f5y-a1-m2-cB
86 1se8-a1-m2-cA 205 105 0.3737 0.1805 0.3524 6.38e-09 1se8-a1-m1-cA_1se8-a1-m2-cA
87 1se8-a1-m2-cA 205 79 0.3535 0.1707 0.4430 6.95e-08 1se8-a1-m1-cA_1se8-a1-m2-cA
88 1se8-a1-m1-cA 205 105 0.3737 0.1805 0.3524 6.38e-09 1se8-a1-m1-cA_1se8-a1-m2-cA
89 1se8-a1-m1-cA 205 79 0.3535 0.1707 0.4430 6.95e-08 1se8-a1-m1-cA_1se8-a1-m2-cA
90 1ue7-a1-m2-cA 106 79 0.2525 0.2358 0.3165 2.22e-07 1ue7-a1-m2-cB_1ue7-a1-m2-cA
91 1ue7-a1-m1-cA 106 79 0.2525 0.2358 0.3165 2.22e-07 1ue7-a1-m2-cB_1ue7-a1-m1-cA
92 5t7d-a2-m1-cB 173 49 0.1616 0.0925 0.3265 0.64 5t7d-a2-m1-cB_5t7d-a2-m1-cD
93 5t7d-a2-m1-cD 174 49 0.1616 0.0920 0.3265 0.69 5t7d-a2-m1-cB_5t7d-a2-m1-cD
94 6cqk-a1-m1-cB 93 65 0.1414 0.1505 0.2154 1.1 6cqk-a1-m1-cD_6cqk-a1-m1-cB
95 6l3h-a1-m1-cB 741 38 0.1313 0.0175 0.3421 7.7 6l3h-a1-m1-cA_6l3h-a1-m1-cB
96 6l3h-a1-m1-cA 741 38 0.1313 0.0175 0.3421 7.7 6l3h-a1-m1-cA_6l3h-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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