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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
AMDMYVVIVYDVAVERVNRVKKFLRRHLHWVQNSVFEGEVTLAEFERIKAGLLDLIDEDE
DSVVIYKLRSMPKREVLGM

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5g4d-a1-m2-cA 79 79 1.0000 1.0000 1.0000 8.07e-53 5g4d-a1-m1-cA_5g4d-a1-m2-cA
2 5g4d-a1-m1-cA 79 79 1.0000 1.0000 1.0000 8.07e-53 5g4d-a1-m1-cA_5g4d-a1-m2-cA
3 7ei1-a1-m1-cR 84 76 0.7595 0.7143 0.7895 2.12e-40 7ei1-a1-m1-cQ_7ei1-a1-m1-cR
4 7ei1-a1-m1-cQ 84 76 0.7595 0.7143 0.7895 2.12e-40 7ei1-a1-m1-cQ_7ei1-a1-m1-cR
5 6k2e-a1-m1-cB 87 63 0.4430 0.4023 0.5556 1.64e-16 6k2e-a1-m1-cB_6k2e-a1-m1-cA
6 6k2e-a1-m1-cA 88 63 0.4430 0.3977 0.5556 1.74e-16 6k2e-a1-m1-cB_6k2e-a1-m1-cA
7 4es1-a1-m2-cA 95 79 0.3797 0.3158 0.3797 1.05e-08 4es1-a1-m1-cA_4es1-a1-m2-cA
8 4es1-a1-m1-cA 95 79 0.3797 0.3158 0.3797 1.05e-08 4es1-a1-m1-cA_4es1-a1-m2-cA
9 8d3q-a1-m1-cF 98 79 0.3797 0.3061 0.3797 1.17e-08 8d3q-a1-m1-cE_8d3q-a1-m1-cF
10 8d3q-a1-m1-cE 98 79 0.3797 0.3061 0.3797 1.17e-08 8d3q-a1-m1-cE_8d3q-a1-m1-cF
11 4qr2-a1-m1-cA 83 83 0.4430 0.4217 0.4217 1.24e-08 4qr2-a1-m1-cB_4qr2-a1-m1-cA
12 4qr2-a1-m1-cB 82 79 0.4177 0.4024 0.4177 1.50e-08 4qr2-a1-m1-cB_4qr2-a1-m1-cA
13 5h1o-a1-m1-cB 83 69 0.3544 0.3373 0.4058 1.26e-06 5h1o-a1-m1-cB_5h1o-a1-m1-cA
14 5h1o-a1-m1-cA 86 71 0.3544 0.3256 0.3944 2.00e-06 5h1o-a1-m1-cB_5h1o-a1-m1-cA
15 7cr8-a6-m1-cF 93 70 0.3038 0.2581 0.3429 3.56e-06 7cr8-a6-m1-cE_7cr8-a6-m1-cF
16 7cr8-a6-m1-cE 93 70 0.3038 0.2581 0.3429 3.56e-06 7cr8-a6-m1-cE_7cr8-a6-m1-cF
17 7f84-a1-m1-cB 89 71 0.2785 0.2472 0.3099 4.27e-06 7f84-a1-m1-cA_7f84-a1-m1-cB
18 7f84-a1-m1-cA 89 71 0.2785 0.2472 0.3099 4.27e-06 7f84-a1-m1-cA_7f84-a1-m1-cB
19 2ivy-a1-m2-cA 88 51 0.2278 0.2045 0.3529 0.023 2ivy-a1-m1-cA_2ivy-a1-m2-cA
20 2ivy-a1-m1-cA 88 51 0.2278 0.2045 0.3529 0.023 2ivy-a1-m1-cA_2ivy-a1-m2-cA
21 6ed2-a1-m4-cA 591 40 0.2025 0.0271 0.4000 0.30 6ed2-a1-m1-cA_6ed2-a1-m4-cA, 6ed2-a1-m2-cA_6ed2-a1-m4-cA, 6ed2-a1-m3-cA_6ed2-a1-m4-cA
22 6ed2-a1-m3-cA 591 40 0.2025 0.0271 0.4000 0.30 6ed2-a1-m3-cA_6ed2-a1-m4-cA
23 6ed2-a1-m2-cA 591 40 0.2025 0.0271 0.4000 0.30 6ed2-a1-m2-cA_6ed2-a1-m4-cA
24 6ed2-a1-m1-cA 591 40 0.2025 0.0271 0.4000 0.30 6ed2-a1-m1-cA_6ed2-a1-m4-cA
25 7mid-a1-m1-cD 91 68 0.2152 0.1868 0.2500 0.95 7mid-a1-m1-cD_7mid-a1-m1-cC
26 7mid-a1-m1-cC 95 68 0.2152 0.1789 0.2500 1.2 7mid-a1-m1-cD_7mid-a1-m1-cC
27 2ntx-a2-m2-cA 300 42 0.2152 0.0567 0.4048 1.6 2ntx-a2-m1-cA_2ntx-a2-m2-cA, 2ntx-a2-m2-cB_2ntx-a2-m2-cA
28 2ntx-a2-m1-cA 300 42 0.2152 0.0567 0.4048 1.6 2ntx-a2-m1-cA_2ntx-a2-m2-cA, 2ntx-a2-m2-cB_2ntx-a2-m1-cA
29 2ntx-a2-m2-cB 273 42 0.2152 0.0623 0.4048 2.1 2ntx-a2-m2-cB_2ntx-a2-m1-cA, 2ntx-a2-m2-cB_2ntx-a2-m2-cA
30 1qou-a1-m1-cB 161 38 0.1646 0.0807 0.3421 5.0 1qou-a1-m1-cA_1qou-a1-m1-cB
31 2ozv-a1-m1-cA 200 40 0.1899 0.0750 0.3750 6.0 2ozv-a1-m1-cA_2ozv-a1-m1-cB
32 2ozv-a1-m1-cB 202 40 0.1899 0.0743 0.3750 6.2 2ozv-a1-m1-cA_2ozv-a1-m1-cB
33 1qou-a1-m1-cA 154 38 0.1646 0.0844 0.3421 6.7 1qou-a1-m1-cA_1qou-a1-m1-cB
34 4fin-a1-m1-cA 528 30 0.1139 0.0170 0.3000 9.7 4fin-a1-m1-cB_4fin-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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