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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=67)
AMDPEFMGREVENLILENTQLLETKNALNIVKNDLIAKVDELTCEKDVLQGELEAVKQAK
LKLEEKN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2w83-a1-m1-cC 67 67 1.0000 1.0000 1.0000 2.17e-41 2w83-a1-m1-cD_2w83-a1-m1-cC
2 2w83-a1-m1-cD 62 62 0.9254 1.0000 1.0000 5.65e-37 2w83-a1-m1-cD_2w83-a1-m1-cC
3 6ejn-a1-m1-cD 61 60 0.6716 0.7377 0.7500 1.17e-25 6ejn-a1-m1-cC_6ejn-a1-m1-cD
4 6ejn-a1-m1-cC 60 58 0.6716 0.7500 0.7759 1.22e-25 6ejn-a1-m1-cC_6ejn-a1-m1-cD
5 4pxj-a2-m2-cC 61 66 0.5672 0.6230 0.5758 2.14e-17 4pxj-a2-m1-cC_4pxj-a2-m2-cC
6 4pxj-a2-m1-cC 61 66 0.5672 0.6230 0.5758 2.14e-17 4pxj-a2-m1-cC_4pxj-a2-m2-cC
7 7qrh-a1-m1-cAAA 209 58 0.2388 0.0766 0.2759 2.2 7qrh-a1-m1-cAAA_7qrh-a1-m1-cBBB
8 7qrh-a1-m1-cBBB 211 58 0.2388 0.0758 0.2759 2.3 7qrh-a1-m1-cAAA_7qrh-a1-m1-cBBB
9 2vsc-a2-m1-cD 115 48 0.2090 0.1217 0.2917 5.1 2vsc-a2-m1-cC_2vsc-a2-m1-cD
10 2vsc-a2-m1-cC 114 48 0.2090 0.1228 0.2917 5.1 2vsc-a2-m1-cC_2vsc-a2-m1-cD
11 4lrz-a2-m1-cG 294 50 0.2687 0.0612 0.3600 7.7 4lrz-a2-m1-cE_4lrz-a2-m1-cG
12 4lrz-a2-m1-cE 294 50 0.2687 0.0612 0.3600 7.7 4lrz-a2-m1-cE_4lrz-a2-m1-cG

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Reference:
Jacob Schwartz et al.

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