Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
AMETLHITKTMKNIEVPETKTASFECEVSHFNVPSMWLKNGVEIEMSEKFKIVVQGKLHQ
LIIMNTSTEDSAEYTFVCGNDQVSATLTVT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5jdj-a1-m1-cL 90 90 1.0000 1.0000 1.0000 7.22e-63 5jdj-a1-m1-cL_5jdj-a1-m1-cA
2 5jdj-a1-m1-cA 91 90 1.0000 0.9890 1.0000 7.28e-63 5jdj-a1-m1-cL_5jdj-a1-m1-cA
3 1waa-a1-m1-cD 93 89 0.3111 0.3011 0.3146 1.29e-07 1waa-a1-m1-cA_1waa-a1-m1-cD, 1waa-a1-m1-cC_1waa-a1-m1-cD
4 1waa-a1-m1-cC 93 89 0.3111 0.3011 0.3146 1.29e-07 1waa-a1-m1-cC_1waa-a1-m1-cD, 1waa-a1-m1-cC_1waa-a1-m1-cF
5 1waa-a1-m1-cA 92 89 0.3111 0.3043 0.3146 1.34e-07 1waa-a1-m1-cA_1waa-a1-m1-cD
6 1waa-a1-m1-cF 93 89 0.3000 0.2903 0.3034 1.09e-06 1waa-a1-m1-cC_1waa-a1-m1-cF
7 1tlk-a1-m2-cA 103 86 0.2889 0.2524 0.3023 5.72e-05 1tlk-a1-m1-cA_1tlk-a1-m2-cA
8 1tlk-a1-m1-cA 103 86 0.2889 0.2524 0.3023 5.72e-05 1tlk-a1-m1-cA_1tlk-a1-m2-cA
9 2j8h-a1-m4-cA 195 89 0.2667 0.1231 0.2697 4.61e-04 2j8h-a1-m2-cA_2j8h-a1-m4-cA, 2j8h-a1-m3-cA_2j8h-a1-m4-cA
10 2j8h-a1-m3-cA 195 89 0.2667 0.1231 0.2697 4.61e-04 2j8h-a1-m3-cA_2j8h-a1-m4-cA
11 2j8h-a1-m2-cA 195 89 0.2667 0.1231 0.2697 4.61e-04 2j8h-a1-m2-cA_2j8h-a1-m4-cA
12 2yxm-a1-m2-cA 92 75 0.2444 0.2391 0.2933 0.002 2yxm-a1-m1-cA_2yxm-a1-m2-cA
13 2yxm-a1-m1-cA 92 75 0.2444 0.2391 0.2933 0.002 2yxm-a1-m1-cA_2yxm-a1-m2-cA
14 1qz1-a1-m2-cA 288 78 0.2222 0.0694 0.2564 0.023 1qz1-a1-m1-cA_1qz1-a1-m2-cA
15 1qz1-a1-m1-cA 288 78 0.2222 0.0694 0.2564 0.023 1qz1-a1-m1-cA_1qz1-a1-m2-cA
16 1koa-a1-m2-cA 447 67 0.2333 0.0470 0.3134 0.049 1koa-a1-m1-cA_1koa-a1-m2-cA
17 1koa-a1-m1-cA 447 67 0.2333 0.0470 0.3134 0.049 1koa-a1-m1-cA_1koa-a1-m2-cA
18 7y9a-a1-m2-cA 192 79 0.2444 0.1146 0.2785 0.12 7y9a-a1-m1-cA_7y9a-a1-m2-cA
19 7y9a-a1-m1-cA 192 79 0.2444 0.1146 0.2785 0.12 7y9a-a1-m1-cA_7y9a-a1-m2-cA
20 7y95-a1-m1-cA 100 76 0.2444 0.2200 0.2895 0.80 7y95-a1-m1-cB_7y95-a1-m1-cA
21 7y95-a1-m1-cB 98 76 0.2444 0.2245 0.2895 0.81 7y95-a1-m1-cB_7y95-a1-m1-cA
22 3p3y-a1-m2-cA 390 68 0.2556 0.0590 0.3382 3.9 3p3y-a1-m1-cA_3p3y-a1-m2-cA
23 3p3y-a1-m1-cA 390 68 0.2556 0.0590 0.3382 3.9 3p3y-a1-m1-cA_3p3y-a1-m2-cA
24 5ftt-a1-m1-cE 259 58 0.2111 0.0734 0.3276 4.1 5ftt-a1-m1-cE_5ftt-a1-m1-cA
25 7za2-a1-m1-cH 251 58 0.2111 0.0757 0.3276 4.1 7za2-a1-m1-cE_7za2-a1-m1-cH
26 7za2-a1-m1-cE 251 58 0.2111 0.0757 0.3276 4.1 7za2-a1-m1-cE_7za2-a1-m1-cH
27 7za1-a1-m1-cH 251 58 0.2111 0.0757 0.3276 4.1 7za1-a1-m1-cF_7za1-a1-m1-cH
28 7za1-a1-m1-cF 251 58 0.2111 0.0757 0.3276 4.1 7za1-a1-m1-cF_7za1-a1-m1-cH
29 5ftt-a1-m1-cA 262 58 0.2111 0.0725 0.3276 4.1 5ftt-a1-m1-cE_5ftt-a1-m1-cA
30 3dkh-a2-m2-cB 558 22 0.1222 0.0197 0.5000 4.8 3dkh-a2-m1-cA_3dkh-a2-m2-cB
31 3dkh-a2-m1-cA 558 22 0.1222 0.0197 0.5000 4.8 3dkh-a2-m1-cA_3dkh-a2-m2-cB
32 2q9o-a1-m1-cB 558 22 0.1222 0.0197 0.5000 4.8 2q9o-a1-m1-cA_2q9o-a1-m1-cB
33 2q9o-a1-m1-cA 558 22 0.1222 0.0197 0.5000 4.8 2q9o-a1-m1-cA_2q9o-a1-m1-cB
34 1evt-a1-m1-cD 192 71 0.2444 0.1146 0.3099 6.5 1evt-a1-m1-cC_1evt-a1-m1-cD
35 1evt-a1-m1-cC 191 36 0.1778 0.0838 0.4444 8.2 1evt-a1-m1-cC_1evt-a1-m1-cD
36 3p6b-a1-m2-cB 186 50 0.1556 0.0753 0.2800 8.6 3p6b-a1-m1-cA_3p6b-a1-m2-cB
37 3p6b-a1-m1-cA 186 50 0.1556 0.0753 0.2800 8.6 3p6b-a1-m1-cA_3p6b-a1-m2-cB
38 1cvs-a2-m2-cD 196 33 0.1667 0.0765 0.4545 9.1 1cvs-a2-m1-cD_1cvs-a2-m2-cD, 1cvs-a2-m2-cD_1cvs-a2-m2-cC
39 1cvs-a2-m1-cD 196 33 0.1667 0.0765 0.4545 9.1 1cvs-a2-m1-cD_1cvs-a2-m2-cD
40 7ysh-a1-m1-cE 212 33 0.1667 0.0708 0.4545 10.0 7ysh-a1-m1-cE_7ysh-a1-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600