Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=61)
AMGKCSVLKKVACAAAIAGAVAACGGIDLPCVLAALKAAEGCASCFCEDHCHGVCKDLHL
C

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2lre-a1-m1-cB 61 61 1.0000 1.0000 1.0000 1.89e-35 2lre-a1-m1-cA_2lre-a1-m1-cB
2 2lre-a1-m1-cA 61 61 1.0000 1.0000 1.0000 1.89e-35 2lre-a1-m1-cA_2lre-a1-m1-cB
3 1tbg-a1-m1-cD 340 31 0.2295 0.0412 0.4516 0.19 1tbg-a1-m1-cB_1tbg-a1-m1-cD, 1tbg-a1-m1-cC_1tbg-a1-m1-cD
4 1tbg-a1-m1-cC 340 31 0.2295 0.0412 0.4516 0.19 1tbg-a1-m1-cC_1tbg-a1-m1-cD
5 1tbg-a1-m1-cB 340 31 0.2295 0.0412 0.4516 0.19 1tbg-a1-m1-cB_1tbg-a1-m1-cD
6 6qcl-a1-m1-cA 215 24 0.1639 0.0465 0.4167 1.5 6qcl-a1-m1-cA_6qcl-a1-m1-cC, 6qcl-a1-m1-cA_6qcl-a1-m1-cE, 6qcl-a1-m1-cA_6qcl-a1-m1-cG
7 6qcl-a1-m1-cE 256 24 0.1639 0.0391 0.4167 1.5 6qcl-a1-m1-cA_6qcl-a1-m1-cE
8 6qcl-a1-m1-cG 261 24 0.1639 0.0383 0.4167 1.5 6qcl-a1-m1-cA_6qcl-a1-m1-cG
9 6qcl-a1-m1-cC 261 24 0.1639 0.0383 0.4167 1.5 6qcl-a1-m1-cA_6qcl-a1-m1-cC
10 6m8s-a1-m1-cK 332 33 0.2131 0.0392 0.3939 2.5 6m8s-a1-m1-cK_6m8s-a1-m1-cG
11 6m8s-a1-m1-cG 334 27 0.1967 0.0359 0.4444 3.7 6m8s-a1-m1-cK_6m8s-a1-m1-cG
12 2x28-a2-m2-cA 219 41 0.2295 0.0639 0.3415 5.6 2x28-a2-m1-cA_2x28-a2-m2-cA
13 2x28-a2-m1-cA 219 41 0.2295 0.0639 0.3415 5.6 2x28-a2-m1-cA_2x28-a2-m2-cA
14 4v3p-a1-m3-cSa 380 26 0.1803 0.0289 0.4231 7.2 4v3p-a1-m2-cSa_4v3p-a1-m3-cSa
15 4v3p-a1-m2-cSa 380 26 0.1803 0.0289 0.4231 7.2 4v3p-a1-m2-cSa_4v3p-a1-m3-cSa

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600