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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
AMGKVTHSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILE
INNRAADALNSSMLKDFLSQPSLGLLVRTYPEL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3kze-a1-m1-cA 93 93 1.0000 1.0000 1.0000 3.26e-64 3kze-a1-m1-cC_3kze-a1-m1-cA
2 3kze-a1-m1-cC 87 91 0.9355 1.0000 0.9560 7.81e-56 3kze-a1-m1-cC_3kze-a1-m1-cA
3 7qsa-a1-m1-cA 85 54 0.2151 0.2353 0.3704 3.29e-04 7qsa-a1-m1-cB_7qsa-a1-m1-cA
4 5vwi-a1-m1-cB 87 54 0.2043 0.2184 0.3519 7.64e-04 5vwi-a1-m1-cB_5vwi-a1-m1-cA
5 7qsb-a1-m1-cA 84 79 0.2903 0.3214 0.3418 0.001 7qsb-a1-m1-cB_7qsb-a1-m1-cA
6 7qsb-a1-m1-cB 80 83 0.2796 0.3250 0.3133 0.002 7qsb-a1-m1-cB_7qsb-a1-m1-cA
7 5vwi-a1-m1-cA 92 66 0.2581 0.2609 0.3636 0.003 5vwi-a1-m1-cB_5vwi-a1-m1-cA
8 5tyt-a2-m2-cD 89 73 0.2688 0.2809 0.3425 0.005 5tyt-a2-m1-cC_5tyt-a2-m2-cD
9 4q2p-a1-m1-cB 87 43 0.1613 0.1724 0.3488 0.006 4q2p-a1-m1-cB_4q2p-a1-m1-cA
10 5tyt-a2-m1-cC 87 73 0.2688 0.2874 0.3425 0.006 5tyt-a2-m1-cC_5tyt-a2-m2-cD
11 4q2p-a1-m1-cA 98 44 0.1613 0.1531 0.3409 0.007 4q2p-a1-m1-cB_4q2p-a1-m1-cA, 4q2p-a1-m1-cC_4q2p-a1-m1-cA
12 1q3p-a2-m2-cB 103 53 0.1613 0.1456 0.2830 0.012 1q3p-a2-m1-cB_1q3p-a2-m2-cB, 1q3p-a2-m2-cA_1q3p-a2-m2-cB
13 1q3p-a2-m1-cB 103 53 0.1613 0.1456 0.2830 0.012 1q3p-a2-m1-cB_1q3p-a2-m2-cB
14 1q3p-a2-m2-cA 98 53 0.1613 0.1531 0.2830 0.013 1q3p-a2-m1-cA_1q3p-a2-m2-cA, 1q3p-a2-m2-cA_1q3p-a2-m2-cB
15 1q3p-a2-m1-cA 98 53 0.1613 0.1531 0.2830 0.013 1q3p-a2-m1-cA_1q3p-a2-m2-cA
16 6nek-a1-m2-cA 86 70 0.2581 0.2791 0.3429 0.016 6nek-a1-m1-cA_6nek-a1-m2-cA
17 6nek-a1-m1-cA 86 70 0.2581 0.2791 0.3429 0.016 6nek-a1-m1-cA_6nek-a1-m2-cA
18 4q2q-a1-m2-cA 90 46 0.1935 0.2000 0.3913 0.020 4q2q-a1-m1-cA_4q2q-a1-m2-cA
19 4q2q-a1-m1-cA 90 46 0.1935 0.2000 0.3913 0.020 4q2q-a1-m1-cA_4q2q-a1-m2-cA
20 3tsw-a5-m1-cD 199 46 0.1935 0.0905 0.3913 0.054 3tsw-a5-m1-cB_3tsw-a5-m1-cD
21 3tsw-a5-m1-cB 194 46 0.1935 0.0928 0.3913 0.057 3tsw-a5-m1-cB_3tsw-a5-m1-cD
22 4q2p-a1-m1-cC 80 43 0.1505 0.1750 0.3256 0.15 4q2p-a1-m1-cC_4q2p-a1-m1-cA
23 2w7r-a1-m1-cB 95 87 0.2366 0.2316 0.2529 0.21 2w7r-a1-m1-cA_2w7r-a1-m1-cB
24 2w7r-a1-m1-cA 95 87 0.2366 0.2316 0.2529 0.21 2w7r-a1-m1-cA_2w7r-a1-m1-cB
25 3qdo-a1-m2-cA 109 81 0.2581 0.2202 0.2963 0.23 3qdo-a1-m1-cA_3qdo-a1-m2-cA
26 3qdo-a1-m1-cA 109 81 0.2581 0.2202 0.2963 0.23 3qdo-a1-m1-cA_3qdo-a1-m2-cA
27 3dj1-a3-m6-cB 110 27 0.1290 0.1091 0.4444 0.24 3dj1-a3-m5-cB_3dj1-a3-m6-cB, 3dj1-a3-m6-cB_3dj1-a3-m1-cA
28 3dj1-a3-m5-cB 110 27 0.1290 0.1091 0.4444 0.24 3dj1-a3-m5-cB_3dj1-a3-m6-cB
29 3qe1-a1-m2-cA 102 81 0.2581 0.2353 0.2963 0.26 3qe1-a1-m1-cA_3qe1-a1-m2-cA
30 3qe1-a1-m1-cA 102 81 0.2581 0.2353 0.2963 0.26 3qe1-a1-m1-cA_3qe1-a1-m2-cA
31 3dj1-a3-m1-cA 115 27 0.1290 0.1043 0.4444 0.26 3dj1-a3-m6-cB_3dj1-a3-m1-cA
32 7mfw-a2-m2-cB 98 78 0.2366 0.2245 0.2821 0.61 7mfw-a2-m1-cA_7mfw-a2-m2-cB
33 7mfw-a1-m1-cB 98 78 0.2366 0.2245 0.2821 0.61 7mfw-a1-m1-cA_7mfw-a1-m1-cB
34 5jd8-a1-m3-cA 272 38 0.1398 0.0478 0.3421 0.66 5jd8-a1-m2-cA_5jd8-a1-m3-cA
35 5jd8-a1-m2-cA 272 38 0.1398 0.0478 0.3421 0.66 5jd8-a1-m2-cA_5jd8-a1-m3-cA
36 7mfw-a2-m1-cA 93 78 0.2366 0.2366 0.2821 0.73 7mfw-a2-m1-cA_7mfw-a2-m2-cB
37 7mfw-a1-m1-cA 93 78 0.2366 0.2366 0.2821 0.73 7mfw-a1-m1-cA_7mfw-a1-m1-cB
38 7xfs-a1-m1-cB 96 41 0.1398 0.1354 0.3171 0.75 7xfs-a1-m1-cA_7xfs-a1-m1-cB
39 7xfs-a1-m1-cA 96 41 0.1398 0.1354 0.3171 0.75 7xfs-a1-m1-cA_7xfs-a1-m1-cB
40 1ky9-a1-m6-cA 299 65 0.2258 0.0702 0.3231 0.86 1ky9-a1-m1-cA_1ky9-a1-m6-cA, 1ky9-a1-m5-cA_1ky9-a1-m6-cA
41 1ky9-a1-m5-cA 299 65 0.2258 0.0702 0.3231 0.86 1ky9-a1-m5-cA_1ky9-a1-m6-cA
42 1ky9-a1-m1-cA 299 65 0.2258 0.0702 0.3231 0.86 1ky9-a1-m1-cA_1ky9-a1-m6-cA
43 1ky9-a2-m9-cB 383 65 0.2258 0.0548 0.3231 1.3 1ky9-a2-m7-cB_1ky9-a2-m9-cB
44 1ky9-a2-m9-cB 383 48 0.1828 0.0444 0.3542 4.8 1ky9-a2-m7-cB_1ky9-a2-m9-cB
45 1ky9-a2-m7-cB 383 65 0.2258 0.0548 0.3231 1.3 1ky9-a2-m7-cB_1ky9-a2-m9-cB
46 1ky9-a2-m7-cB 383 48 0.1828 0.0444 0.3542 4.8 1ky9-a2-m7-cB_1ky9-a2-m9-cB
47 3tmh-a1-m2-cI 82 44 0.1505 0.1707 0.3182 1.9 3tmh-a1-m1-cE_3tmh-a1-m2-cI
48 3tmh-a1-m1-cE 82 44 0.1505 0.1707 0.3182 1.9 3tmh-a1-m1-cE_3tmh-a1-m2-cI
49 7qsa-a1-m1-cB 78 39 0.1720 0.2051 0.4103 2.0 7qsa-a1-m1-cB_7qsa-a1-m1-cA
50 6rqr-a1-m1-cB 125 42 0.1613 0.1200 0.3571 2.2 6rqr-a1-m1-cA_6rqr-a1-m1-cB
51 6rqr-a1-m1-cA 125 42 0.1613 0.1200 0.3571 2.2 6rqr-a1-m1-cA_6rqr-a1-m1-cB
52 3khf-a3-m1-cB 97 61 0.2151 0.2062 0.3279 2.3 3khf-a3-m1-cA_3khf-a3-m1-cB
53 3khf-a3-m1-cA 96 61 0.2151 0.2083 0.3279 2.3 3khf-a3-m1-cA_3khf-a3-m1-cB
54 6eko-a1-m1-cB 303 36 0.1183 0.0363 0.3056 3.7 6eko-a1-m1-cA_6eko-a1-m1-cB
55 6eko-a1-m1-cA 303 36 0.1183 0.0363 0.3056 3.7 6eko-a1-m1-cA_6eko-a1-m1-cB
56 1o60-a1-m1-cD 260 26 0.1290 0.0462 0.4615 3.9 1o60-a1-m1-cA_1o60-a1-m1-cD, 1o60-a1-m1-cB_1o60-a1-m1-cD, 1o60-a1-m1-cC_1o60-a1-m1-cD
57 1o60-a1-m1-cC 260 26 0.1290 0.0462 0.4615 3.9 1o60-a1-m1-cC_1o60-a1-m1-cD
58 1o60-a1-m1-cB 260 26 0.1290 0.0462 0.4615 3.9 1o60-a1-m1-cB_1o60-a1-m1-cD
59 1o60-a1-m1-cA 260 26 0.1290 0.0462 0.4615 3.9 1o60-a1-m1-cA_1o60-a1-m1-cD
60 3mh4-a2-m9-cB 383 49 0.2043 0.0496 0.3878 4.0 3mh4-a2-m11-cB_3mh4-a2-m9-cB, 3mh4-a2-m7-cB_3mh4-a2-m9-cB
61 3mh4-a2-m9-cB 383 38 0.1398 0.0339 0.3421 5.7 3mh4-a2-m11-cB_3mh4-a2-m9-cB, 3mh4-a2-m7-cB_3mh4-a2-m9-cB
62 3mh4-a2-m7-cB 383 49 0.2043 0.0496 0.3878 4.0 3mh4-a2-m7-cB_3mh4-a2-m9-cB
63 3mh4-a2-m7-cB 383 38 0.1398 0.0339 0.3421 5.7 3mh4-a2-m7-cB_3mh4-a2-m9-cB
64 3mh4-a2-m11-cB 383 49 0.2043 0.0496 0.3878 4.0 3mh4-a2-m11-cB_3mh4-a2-m9-cB
65 3mh4-a2-m11-cB 383 38 0.1398 0.0339 0.3421 5.7 3mh4-a2-m11-cB_3mh4-a2-m9-cB
66 4c2e-a1-m1-cB 435 48 0.2043 0.0437 0.3958 4.2 4c2e-a1-m1-cA_4c2e-a1-m1-cB
67 4c2e-a1-m1-cA 435 48 0.2043 0.0437 0.3958 4.2 4c2e-a1-m1-cA_4c2e-a1-m1-cB
68 4c2d-a2-m1-cC 433 48 0.2043 0.0439 0.3958 4.2 4c2d-a2-m1-cD_4c2d-a2-m1-cC
69 2zle-a1-m1-cM 396 49 0.2043 0.0480 0.3878 4.7 2zle-a1-m1-cG_2zle-a1-m1-cM
70 2zle-a1-m1-cM 396 38 0.1398 0.0328 0.3421 6.3 2zle-a1-m1-cG_2zle-a1-m1-cM
71 2zle-a1-m1-cI 396 49 0.2043 0.0480 0.3878 4.7 2zle-a1-m1-cF_2zle-a1-m1-cI
72 2zle-a1-m1-cI 396 38 0.1398 0.0328 0.3421 6.3 2zle-a1-m1-cF_2zle-a1-m1-cI
73 2zle-a1-m1-cG 396 49 0.2043 0.0480 0.3878 4.7 2zle-a1-m1-cG_2zle-a1-m1-cM
74 2zle-a1-m1-cG 396 38 0.1398 0.0328 0.3421 6.3 2zle-a1-m1-cG_2zle-a1-m1-cM
75 2zle-a1-m1-cF 396 49 0.2043 0.0480 0.3878 4.7 2zle-a1-m1-cF_2zle-a1-m1-cI
76 2zle-a1-m1-cF 396 38 0.1398 0.0328 0.3421 6.3 2zle-a1-m1-cF_2zle-a1-m1-cI
77 6jjo-a1-m2-cE 388 49 0.2043 0.0490 0.3878 4.8 6jjo-a1-m2-cA_6jjo-a1-m2-cE
78 6jjo-a1-m2-cE 388 38 0.1398 0.0335 0.3421 6.6 6jjo-a1-m2-cA_6jjo-a1-m2-cE
79 6jjo-a1-m1-cE 388 49 0.2043 0.0490 0.3878 4.8 6jjo-a1-m2-cF_6jjo-a1-m1-cE
80 6jjo-a1-m1-cE 388 38 0.1398 0.0335 0.3421 6.6 6jjo-a1-m2-cF_6jjo-a1-m1-cE
81 6jjk-a1-m2-cB 392 49 0.2043 0.0485 0.3878 4.8 6jjk-a1-m2-cA_6jjk-a1-m2-cB
82 6jjk-a1-m2-cB 392 34 0.1398 0.0332 0.3824 6.5 6jjk-a1-m2-cA_6jjk-a1-m2-cB
83 6jjo-a1-m2-cA 381 49 0.2043 0.0499 0.3878 4.8 6jjo-a1-m2-cA_6jjo-a1-m2-cE
84 6jjo-a1-m2-cA 381 38 0.1398 0.0341 0.3421 6.6 6jjo-a1-m2-cA_6jjo-a1-m2-cE
85 6jjk-a1-m2-cA 381 49 0.2043 0.0499 0.3878 4.8 6jjk-a1-m2-cA_6jjk-a1-m2-cB
86 6jjk-a1-m2-cA 381 38 0.1398 0.0341 0.3421 6.6 6jjk-a1-m2-cA_6jjk-a1-m2-cB
87 6jjo-a1-m2-cF 379 49 0.2043 0.0501 0.3878 5.1 6jjo-a1-m2-cF_6jjo-a1-m1-cE
88 6jjo-a1-m2-cF 379 38 0.1398 0.0343 0.3421 7.3 6jjo-a1-m2-cF_6jjo-a1-m1-cE
89 2z17-a1-m2-cA 94 76 0.1828 0.1809 0.2237 5.4 2z17-a1-m1-cA_2z17-a1-m2-cA
90 2z17-a1-m1-cA 94 76 0.1828 0.1809 0.2237 5.4 2z17-a1-m1-cA_2z17-a1-m2-cA
91 2p3w-a2-m3-cB 104 54 0.1828 0.1635 0.3148 6.1 2p3w-a2-m1-cB_2p3w-a2-m3-cB
92 2p3w-a2-m1-cB 104 54 0.1828 0.1635 0.3148 6.1 2p3w-a2-m1-cB_2p3w-a2-m3-cB
93 3id3-a1-m1-cB 89 26 0.1075 0.1124 0.3846 7.5 3id3-a1-m1-cA_3id3-a1-m1-cB
94 3id3-a1-m1-cA 89 26 0.1075 0.1124 0.3846 7.5 3id3-a1-m1-cA_3id3-a1-m1-cB
95 8dh7-a1-m1-cB 526 40 0.1398 0.0247 0.3250 9.9 8dh7-a1-m1-cA_8dh7-a1-m1-cB
96 8dh7-a1-m1-cA 526 40 0.1398 0.0247 0.3250 9.9 8dh7-a1-m1-cA_8dh7-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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