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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=65)
AMKDSKAPCVEVFDERDGCKAAGTQKASGDDGFCVKVSMKAIKMNAAEATSVTKNYNTKL
LGAKS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4lmx-a3-m1-cK 65 65 1.0000 1.0000 1.0000 2.21e-42 4lmx-a3-m1-cI_4lmx-a3-m1-cK
2 4lmx-a3-m1-cI 65 65 1.0000 1.0000 1.0000 2.21e-42 4lmx-a3-m1-cI_4lmx-a3-m1-cK
3 4rkh-a1-m1-cF 46 30 0.1077 0.1522 0.2333 6.4 4rkh-a1-m1-cF_4rkh-a1-m1-cE
4 7x2u-a1-m1-cB 540 33 0.1538 0.0185 0.3030 7.0 7x2u-a1-m1-cB_7x2u-a1-m1-cA
5 7x2u-a1-m1-cA 541 33 0.1538 0.0185 0.3030 7.0 7x2u-a1-m1-cB_7x2u-a1-m1-cA
6 4rkh-a1-m1-cE 51 30 0.1077 0.1373 0.2333 9.7 4rkh-a1-m1-cF_4rkh-a1-m1-cE

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Reference:
Jacob Schwartz et al.

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