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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
AMLYLIFYDITDDNLRNRVAEFLKKKGLDRIQYSVFMGDLNSSRLKDVEAGLKIIGNRKK
LQEDERFFILIVPITENQFRERIVIGYS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2ivy-a1-m2-cA 88 88 1.0000 1.0000 1.0000 3.74e-59 2ivy-a1-m1-cA_2ivy-a1-m2-cA
2 2ivy-a1-m1-cA 88 88 1.0000 1.0000 1.0000 3.74e-59 2ivy-a1-m1-cA_2ivy-a1-m2-cA
3 3exc-a1-m2-cX 75 82 0.3523 0.4133 0.3780 4.73e-08 3exc-a1-m1-cX_3exc-a1-m2-cX
4 3exc-a1-m1-cX 75 82 0.3523 0.4133 0.3780 4.73e-08 3exc-a1-m1-cX_3exc-a1-m2-cX
5 1zpw-a2-m2-cX 82 34 0.1932 0.2073 0.5000 0.003 1zpw-a2-m1-cX_1zpw-a2-m2-cX
6 1zpw-a2-m1-cX 82 34 0.1932 0.2073 0.5000 0.003 1zpw-a2-m1-cX_1zpw-a2-m2-cX
7 6k2e-a1-m1-cA 88 72 0.2841 0.2841 0.3472 0.022 6k2e-a1-m1-cB_6k2e-a1-m1-cA
8 6k2e-a1-m1-cB 87 72 0.2841 0.2874 0.3472 0.023 6k2e-a1-m1-cB_6k2e-a1-m1-cA
9 5g4d-a1-m2-cA 79 51 0.2045 0.2278 0.3529 0.026 5g4d-a1-m1-cA_5g4d-a1-m2-cA
10 5g4d-a1-m1-cA 79 51 0.2045 0.2278 0.3529 0.026 5g4d-a1-m1-cA_5g4d-a1-m2-cA
11 7ei1-a1-m1-cR 84 54 0.1932 0.2024 0.3148 0.32 7ei1-a1-m1-cQ_7ei1-a1-m1-cR
12 7ei1-a1-m1-cQ 84 54 0.1932 0.2024 0.3148 0.32 7ei1-a1-m1-cQ_7ei1-a1-m1-cR
13 7kfu-a1-m1-cB 96 33 0.1591 0.1458 0.4242 0.40 7kfu-a1-m1-cA_7kfu-a1-m1-cB
14 7kfu-a1-m1-cA 96 33 0.1591 0.1458 0.4242 0.40 7kfu-a1-m1-cA_7kfu-a1-m1-cB
15 4nqy-a3-m1-cB 409 45 0.1364 0.0293 0.2667 0.78 4nqy-a3-m1-cA_4nqy-a3-m1-cB
16 4nqy-a3-m1-cA 409 45 0.1364 0.0293 0.2667 0.78 4nqy-a3-m1-cA_4nqy-a3-m1-cB
17 7cr8-a6-m1-cF 93 90 0.3182 0.3011 0.3111 1.3 7cr8-a6-m1-cE_7cr8-a6-m1-cF
18 7cr8-a6-m1-cE 93 90 0.3182 0.3011 0.3111 1.3 7cr8-a6-m1-cE_7cr8-a6-m1-cF
19 4po2-a3-m2-cB 215 38 0.1477 0.0605 0.3421 3.4 4po2-a3-m1-cB_4po2-a3-m2-cB, 4po2-a3-m2-cB_4po2-a3-m1-cA, 4po2-a3-m2-cB_4po2-a3-m2-cA
20 4po2-a3-m1-cB 215 38 0.1477 0.0605 0.3421 3.4 4po2-a3-m1-cB_4po2-a3-m2-cB
21 4po2-a3-m2-cA 228 38 0.1477 0.0570 0.3421 3.8 4po2-a3-m1-cA_4po2-a3-m2-cA, 4po2-a3-m2-cB_4po2-a3-m2-cA
22 4po2-a3-m1-cA 228 38 0.1477 0.0570 0.3421 3.8 4po2-a3-m1-cA_4po2-a3-m2-cA, 4po2-a3-m2-cB_4po2-a3-m1-cA
23 2e6u-a3-m3-cX 142 44 0.1705 0.1056 0.3409 6.3 2e6u-a3-m1-cX_2e6u-a3-m3-cX
24 2e6u-a3-m1-cX 142 44 0.1705 0.1056 0.3409 6.3 2e6u-a3-m1-cX_2e6u-a3-m3-cX
25 2e6u-a2-m2-cX 142 44 0.1705 0.1056 0.3409 6.3 2e6u-a2-m1-cX_2e6u-a2-m2-cX
26 2e6u-a2-m1-cX 142 44 0.1705 0.1056 0.3409 6.3 2e6u-a2-m1-cX_2e6u-a2-m2-cX

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Reference:
Jacob Schwartz et al.

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