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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
AMQIFVRTHAMRTDVLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY
NIRQESILHLLLWPR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7rma-a1-m2-cA 75 75 1.0000 1.0000 1.0000 9.15e-52 7rma-a1-m1-cA_7rma-a1-m2-cA
2 7rma-a1-m1-cA 75 75 1.0000 1.0000 1.0000 9.15e-52 7rma-a1-m1-cA_7rma-a1-m2-cA
3 6ob1-a1-m1-cA 75 75 0.8133 0.8133 0.8133 5.63e-37 6ob1-a1-m1-cA_6ob1-a1-m1-cB
4 6nxl-a3-m1-cC 73 71 0.8000 0.8219 0.8451 7.09e-37 6nxl-a3-m1-cC_6nxl-a3-m1-cD
5 6nxl-a3-m1-cD 74 74 0.8133 0.8243 0.8243 7.61e-37 6nxl-a3-m1-cC_6nxl-a3-m1-cD
6 6ob1-a1-m1-cB 75 75 0.8000 0.8000 0.8000 1.08e-35 6ob1-a1-m1-cA_6ob1-a1-m1-cB
7 6njg-a1-m2-cC 76 70 0.7333 0.7237 0.7857 1.53e-34 6njg-a1-m1-cC_6njg-a1-m2-cC
8 6njg-a1-m1-cC 76 70 0.7333 0.7237 0.7857 1.53e-34 6njg-a1-m1-cC_6njg-a1-m2-cC
9 6dj9-a3-m1-cI 78 72 0.7600 0.7308 0.7917 2.25e-33 6dj9-a3-m1-cJ_6dj9-a3-m1-cI
10 6dj9-a3-m1-cJ 77 71 0.7600 0.7403 0.8028 3.48e-33 6dj9-a3-m1-cJ_6dj9-a3-m1-cI
11 5o6t-a2-m1-cD 74 72 0.7200 0.7297 0.7500 4.03e-33 5o6t-a2-m1-cD_5o6t-a2-m1-cC
12 5o6s-a2-m1-cD 75 72 0.7200 0.7200 0.7500 4.37e-33 5o6s-a2-m1-cC_5o6s-a2-m1-cD
13 5o6t-a2-m1-cC 75 72 0.7200 0.7200 0.7500 6.14e-33 5o6t-a2-m1-cD_5o6t-a2-m1-cC
14 5o6s-a2-m1-cC 75 72 0.7200 0.7200 0.7500 6.14e-33 5o6s-a2-m1-cC_5o6s-a2-m1-cD
15 5tog-a2-m2-cA 75 69 0.7067 0.7067 0.7681 1.14e-32 5tog-a2-m1-cA_5tog-a2-m2-cA
16 5tog-a2-m1-cA 75 69 0.7067 0.7067 0.7681 1.14e-32 5tog-a2-m1-cA_5tog-a2-m2-cA
17 8cx9-a4-m1-cJ 74 74 0.7200 0.7297 0.7297 3.04e-31 8cx9-a4-m1-cH_8cx9-a4-m1-cJ
18 8cx9-a4-m1-cH 74 74 0.7200 0.7297 0.7297 3.04e-31 8cx9-a4-m1-cH_8cx9-a4-m1-cJ
19 1ndd-a5-m1-cB 76 74 0.4533 0.4474 0.4595 8.07e-20 1ndd-a5-m1-cD_1ndd-a5-m1-cB
20 1ndd-a5-m1-cA 74 74 0.4533 0.4595 0.4595 9.23e-20 1ndd-a5-m1-cD_1ndd-a5-m1-cA
21 1ndd-a5-m1-cD 73 71 0.4400 0.4521 0.4648 1.54e-19 1ndd-a5-m1-cC_1ndd-a5-m1-cD, 1ndd-a5-m1-cD_1ndd-a5-m1-cA, 1ndd-a5-m1-cD_1ndd-a5-m1-cB
22 1ndd-a5-m1-cC 73 71 0.4400 0.4521 0.4648 1.54e-19 1ndd-a5-m1-cC_1ndd-a5-m1-cD
23 2wyq-a1-m2-cA 77 75 0.3067 0.2987 0.3067 5.67e-06 2wyq-a1-m1-cA_2wyq-a1-m2-cA
24 2wyq-a1-m1-cA 77 75 0.3067 0.2987 0.3067 5.67e-06 2wyq-a1-m1-cA_2wyq-a1-m2-cA
25 7mrj-a1-m1-cA 85 56 0.1867 0.1647 0.2500 0.095 7mrj-a1-m1-cB_7mrj-a1-m1-cA
26 7mrj-a1-m1-cB 75 56 0.1867 0.1867 0.2500 0.100 7mrj-a1-m1-cB_7mrj-a1-m1-cA
27 6ozu-a3-m1-cB 234 38 0.2000 0.0641 0.3947 0.12 6ozu-a3-m1-cB_6ozu-a3-m1-cA
28 6ozu-a3-m1-cA 235 38 0.2000 0.0638 0.3947 0.13 6ozu-a3-m1-cB_6ozu-a3-m1-cA
29 3qa8-a2-m1-cH 541 52 0.2133 0.0296 0.3077 0.44 3qa8-a2-m1-cH_3qa8-a2-m1-cE
30 3qa8-a2-m1-cF 622 52 0.2133 0.0257 0.3077 0.46 3qa8-a2-m1-cE_3qa8-a2-m1-cF
31 3qa8-a2-m1-cE 622 52 0.2133 0.0257 0.3077 0.46 3qa8-a2-m1-cE_3qa8-a2-m1-cF, 3qa8-a2-m1-cH_3qa8-a2-m1-cE
32 5jxf-a4-m1-cC 682 20 0.1467 0.0161 0.5500 4.3 5jxf-a4-m1-cC_5jxf-a4-m5-cB
33 6yn7-a1-m1-cD 440 29 0.1467 0.0250 0.3793 4.4 6yn7-a1-m1-cC_6yn7-a1-m1-cD
34 5jxf-a4-m5-cB 692 20 0.1467 0.0159 0.5500 4.4 5jxf-a4-m1-cC_5jxf-a4-m5-cB
35 6h56-a1-m1-cA 181 17 0.1333 0.0552 0.5882 5.5 6h56-a1-m1-cB_6h56-a1-m1-cA
36 6h56-a1-m1-cB 179 17 0.1333 0.0559 0.5882 5.6 6h56-a1-m1-cB_6h56-a1-m1-cA
37 4kik-a1-m1-cA 618 28 0.1333 0.0162 0.3571 6.6 4kik-a1-m1-cA_4kik-a1-m1-cB
38 4kik-a1-m1-cB 648 28 0.1333 0.0154 0.3571 7.2 4kik-a1-m1-cA_4kik-a1-m1-cB
39 5lnl-a1-m1-cB 132 58 0.2133 0.1212 0.2759 7.2 5lnl-a1-m1-cB_5lnl-a1-m1-cC
40 4e3c-a3-m1-cE 624 28 0.1333 0.0160 0.3571 7.6 4e3c-a3-m1-cD_4e3c-a3-m1-cE
41 4e3c-a3-m1-cD 624 28 0.1333 0.0160 0.3571 7.6 4e3c-a3-m1-cD_4e3c-a3-m1-cE
42 7qyp-a1-m1-cB 519 36 0.1467 0.0212 0.3056 7.8 7qyp-a1-m1-cA_7qyp-a1-m1-cB
43 7qyp-a1-m1-cA 519 36 0.1467 0.0212 0.3056 7.8 7qyp-a1-m1-cA_7qyp-a1-m1-cB
44 5lnl-a1-m1-cC 133 58 0.2133 0.1203 0.2759 7.9 5lnl-a1-m1-cB_5lnl-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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