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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
AMRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGI
GKLASVPAGG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2w1o-a1-m1-cB 70 70 1.0000 1.0000 1.0000 7.66e-44 2w1o-a1-m1-cA_2w1o-a1-m1-cB
2 2w1o-a1-m1-cA 70 70 1.0000 1.0000 1.0000 7.66e-44 2w1o-a1-m1-cA_2w1o-a1-m1-cB
3 3a1y-a1-m1-cF 58 59 0.2571 0.3103 0.3051 0.002 3a1y-a1-m1-cE_3a1y-a1-m1-cF
4 3a1y-a1-m1-cE 58 59 0.2571 0.3103 0.3051 0.002 3a1y-a1-m1-cD_3a1y-a1-m1-cE, 3a1y-a1-m1-cE_3a1y-a1-m1-cF
5 3a1y-a1-m1-cD 58 59 0.2571 0.3103 0.3051 0.002 3a1y-a1-m1-cD_3a1y-a1-m1-cE
6 1rh7-a3-m1-cC 81 33 0.1714 0.1481 0.3636 0.78 1rh7-a3-m1-cB_1rh7-a3-m1-cC
7 1rh7-a3-m1-cB 81 33 0.1714 0.1481 0.3636 0.78 1rh7-a3-m1-cB_1rh7-a3-m1-cC
8 4fu0-a1-m1-cB 343 32 0.2000 0.0408 0.4375 0.88 4fu0-a1-m1-cA_4fu0-a1-m1-cB
9 4fu0-a1-m1-cA 343 32 0.2000 0.0408 0.4375 0.88 4fu0-a1-m1-cA_4fu0-a1-m1-cB
10 2czs-a3-m2-cB 69 25 0.1714 0.1739 0.4800 1.6 2czs-a3-m2-cB_2czs-a3-m1-cA
11 2czs-a3-m1-cA 70 25 0.1714 0.1714 0.4800 1.6 2czs-a3-m2-cB_2czs-a3-m1-cA
12 4fn4-a1-m1-cD 254 19 0.1286 0.0354 0.4737 5.4 4fn4-a1-m1-cA_4fn4-a1-m1-cD, 4fn4-a1-m1-cB_4fn4-a1-m1-cD, 4fn4-a1-m1-cC_4fn4-a1-m1-cD
13 4fn4-a1-m1-cC 254 19 0.1286 0.0354 0.4737 5.4 4fn4-a1-m1-cC_4fn4-a1-m1-cD
14 4fn4-a1-m1-cB 254 19 0.1286 0.0354 0.4737 5.4 4fn4-a1-m1-cB_4fn4-a1-m1-cD
15 4fn4-a1-m1-cA 254 19 0.1286 0.0354 0.4737 5.4 4fn4-a1-m1-cA_4fn4-a1-m1-cD
16 6oux-a1-m1-cA 393 43 0.2286 0.0407 0.3721 9.2 6oux-a1-m1-cB_6oux-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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