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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
AMVVQPDRIRCGAETTVYVIVRCKLDDRVATEAEFSPEDSPSVRMEAKVENEYTISVKAP
NLSSGNVSLKIYSGDLVVCETVISYYTDMEEIGNLLS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6sws-a3-m1-cD 112 97 1.0000 0.8661 1.0000 2.92e-67 6sws-a3-m2-cE_6sws-a3-m1-cD
2 6sws-a3-m2-cE 97 97 1.0000 1.0000 1.0000 3.32e-67 6sws-a3-m2-cE_6sws-a3-m1-cD
3 3fv9-a1-m1-cD 373 29 0.1237 0.0322 0.4138 0.76 3fv9-a1-m1-cD_3fv9-a1-m1-cC
4 3fv9-a1-m1-cC 374 29 0.1237 0.0321 0.4138 0.78 3fv9-a1-m1-cD_3fv9-a1-m1-cC
5 2pce-a1-m1-cH 372 29 0.1237 0.0323 0.4138 0.80 2pce-a1-m1-cD_2pce-a1-m1-cH, 2pce-a1-m1-cG_2pce-a1-m1-cH
6 2pce-a1-m1-cG 372 29 0.1237 0.0323 0.4138 0.80 2pce-a1-m1-cG_2pce-a1-m1-cH
7 2pce-a1-m1-cD 372 29 0.1237 0.0323 0.4138 0.80 2pce-a1-m1-cD_2pce-a1-m1-cH
8 3hdc-a1-m2-cA 148 47 0.1753 0.1149 0.3617 3.2 3hdc-a1-m1-cA_3hdc-a1-m2-cA
9 3hdc-a1-m1-cA 148 47 0.1753 0.1149 0.3617 3.2 3hdc-a1-m1-cA_3hdc-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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