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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
ANALVVKVSYGGVLRRFRVPVKANGQLDLEMAGLKEKIAALFNLSADAELSLTYSDEDGD
VVALVDDNDLFDVTNQRLKFLKINVNAG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6tgp-a1-m1-cB 88 88 1.0000 1.0000 1.0000 6.50e-58 6tgp-a1-m1-cA_6tgp-a1-m1-cB
2 6tgp-a1-m1-cA 88 88 1.0000 1.0000 1.0000 6.50e-58 6tgp-a1-m1-cA_6tgp-a1-m1-cB
3 4lu0-a1-m1-cD 252 59 0.2500 0.0873 0.3729 1.4 4lu0-a1-m1-cA_4lu0-a1-m1-cD, 4lu0-a1-m1-cB_4lu0-a1-m1-cD, 4lu0-a1-m1-cC_4lu0-a1-m1-cD
4 7q1q-a1-m1-cB 30 22 0.1364 0.4000 0.5455 4.0 7q1q-a1-m1-cA_7q1q-a1-m1-cB
5 7q1q-a1-m1-cA 30 22 0.1364 0.4000 0.5455 4.0 7q1q-a1-m1-cA_7q1q-a1-m1-cB
6 5a0y-a1-m1-cD 542 21 0.1250 0.0203 0.5238 4.6 5a0y-a1-m1-cA_5a0y-a1-m1-cD
7 5a0y-a1-m1-cA 542 21 0.1250 0.0203 0.5238 4.6 5a0y-a1-m1-cA_5a0y-a1-m1-cD
8 4lu0-a1-m1-cC 250 48 0.2045 0.0720 0.3750 6.5 4lu0-a1-m1-cC_4lu0-a1-m1-cD
9 4lu0-a1-m1-cA 247 49 0.1932 0.0688 0.3469 6.8 4lu0-a1-m1-cA_4lu0-a1-m1-cD
10 4lu0-a1-m1-cB 247 60 0.2386 0.0850 0.3500 8.2 4lu0-a1-m1-cB_4lu0-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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