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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
ANATVKMGSDSGALVFEPSTVTIKAGEEVKWVNNKLSPHNIVFDADGVPADTAAKLSHKG
LLFAAGESFTSTFTEPGTYTYYCEPHRGAGMVGKVVVE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1pcs-a1-m2-cA 98 98 1.0000 1.0000 1.0000 3.43e-69 1pcs-a1-m1-cA_1pcs-a1-m2-cA
2 1pcs-a1-m1-cA 98 98 1.0000 1.0000 1.0000 3.43e-69 1pcs-a1-m1-cA_1pcs-a1-m2-cA
3 2q5b-a5-m3-cB 105 101 0.6327 0.5905 0.6139 6.20e-39 2q5b-a5-m2-cA_2q5b-a5-m3-cB
4 2q5b-a5-m2-cA 105 101 0.6327 0.5905 0.6139 6.20e-39 2q5b-a5-m1-cC_2q5b-a5-m2-cA, 2q5b-a5-m2-cA_2q5b-a5-m3-cB
5 2q5b-a5-m1-cC 105 101 0.6327 0.5905 0.6139 6.20e-39 2q5b-a5-m1-cC_2q5b-a5-m2-cA
6 1baw-a2-m1-cB 105 101 0.6327 0.5905 0.6139 6.20e-39 1baw-a2-m1-cA_1baw-a2-m1-cB
7 1baw-a2-m1-cA 105 101 0.6327 0.5905 0.6139 6.20e-39 1baw-a2-m1-cA_1baw-a2-m1-cB
8 1baw-a1-m2-cB 105 101 0.6327 0.5905 0.6139 6.20e-39 1baw-a1-m1-cA_1baw-a1-m2-cB
9 1baw-a1-m1-cA 105 101 0.6327 0.5905 0.6139 6.20e-39 1baw-a1-m1-cA_1baw-a1-m2-cB
10 2w8c-a3-m8-cB 106 101 0.6327 0.5849 0.6139 6.74e-39 2w8c-a3-m1-cA_2w8c-a3-m8-cB
11 2w8c-a3-m1-cA 106 101 0.6327 0.5849 0.6139 6.74e-39 2w8c-a3-m1-cA_2w8c-a3-m8-cB
12 7pcy-a1-m4-cA 98 97 0.4490 0.4490 0.4536 4.89e-26 7pcy-a1-m3-cA_7pcy-a1-m4-cA
13 7pcy-a1-m3-cA 98 97 0.4490 0.4490 0.4536 4.89e-26 7pcy-a1-m3-cA_7pcy-a1-m4-cA
14 3ie9-a3-m3-cA 105 89 0.3469 0.3238 0.3820 7.80e-13 3ie9-a3-m2-cA_3ie9-a3-m3-cA
15 3ie9-a3-m2-cA 105 89 0.3469 0.3238 0.3820 7.80e-13 3ie9-a3-m2-cA_3ie9-a3-m3-cA
16 3ie9-a2-m6-cA 105 89 0.3469 0.3238 0.3820 7.80e-13 3ie9-a2-m3-cA_3ie9-a2-m6-cA
17 3ie9-a2-m3-cA 105 89 0.3469 0.3238 0.3820 7.80e-13 3ie9-a2-m3-cA_3ie9-a2-m6-cA
18 3erx-a2-m1-cB 123 88 0.3469 0.2764 0.3864 1.07e-09 3erx-a2-m1-cA_3erx-a2-m1-cB
19 3erx-a2-m1-cA 123 88 0.3469 0.2764 0.3864 1.07e-09 3erx-a2-m1-cA_3erx-a2-m1-cB
20 3erx-a1-m2-cB 123 88 0.3469 0.2764 0.3864 1.07e-09 3erx-a1-m1-cA_3erx-a1-m2-cB
21 3erx-a1-m1-cA 123 88 0.3469 0.2764 0.3864 1.07e-09 3erx-a1-m1-cA_3erx-a1-m2-cB
22 5fc9-a1-m1-cD 95 77 0.2653 0.2737 0.3377 1.27e-05 5fc9-a1-m1-cA_5fc9-a1-m1-cD, 5fc9-a1-m1-cB_5fc9-a1-m1-cD, 5fc9-a1-m1-cC_5fc9-a1-m1-cD
23 5fc9-a1-m1-cC 95 77 0.2653 0.2737 0.3377 1.27e-05 5fc9-a1-m1-cC_5fc9-a1-m1-cD
24 5fc9-a1-m1-cB 95 77 0.2653 0.2737 0.3377 1.27e-05 5fc9-a1-m1-cB_5fc9-a1-m1-cD
25 5fc9-a1-m1-cA 95 77 0.2653 0.2737 0.3377 1.27e-05 5fc9-a1-m1-cA_5fc9-a1-m1-cD
26 6hbe-a1-m1-cC 427 93 0.2959 0.0679 0.3118 3.57e-04 6hbe-a1-m1-cB_6hbe-a1-m1-cC
27 6hbe-a1-m1-cC 427 38 0.1531 0.0351 0.3947 3.6 6hbe-a1-m1-cB_6hbe-a1-m1-cC
28 6hbe-a1-m1-cB 425 93 0.2959 0.0682 0.3118 3.86e-04 6hbe-a1-m1-cB_6hbe-a1-m1-cC
29 6hbe-a1-m1-cB 425 38 0.1531 0.0353 0.3947 3.9 6hbe-a1-m1-cB_6hbe-a1-m1-cC
30 2aan-a2-m2-cA 123 120 0.3469 0.2764 0.2833 0.013 2aan-a2-m1-cA_2aan-a2-m2-cA
31 2aan-a2-m1-cA 123 120 0.3469 0.2764 0.2833 0.013 2aan-a2-m1-cA_2aan-a2-m2-cA
32 6ed1-a2-m1-cC 860 36 0.1224 0.0140 0.3333 2.8 6ed1-a2-m1-cB_6ed1-a2-m1-cC
33 6ed1-a2-m1-cB 860 36 0.1224 0.0140 0.3333 2.8 6ed1-a2-m1-cB_6ed1-a2-m1-cC
34 1fwx-a2-m1-cD 588 102 0.2959 0.0493 0.2843 3.7 1fwx-a2-m1-cD_1fwx-a2-m1-cC
35 1fwx-a2-m1-cC 590 102 0.2959 0.0492 0.2843 3.7 1fwx-a2-m1-cD_1fwx-a2-m1-cC
36 1qni-a3-m1-cF 572 34 0.1531 0.0262 0.4412 9.8 1qni-a3-m1-cE_1qni-a3-m1-cF
37 1qni-a3-m1-cE 572 34 0.1531 0.0262 0.4412 9.8 1qni-a3-m1-cE_1qni-a3-m1-cF

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Reference:
Jacob Schwartz et al.

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